Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.14■□□□□ 0.33
IRX4P78413 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
IRX4P78413 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.14■□□□□ 0.33
IRX4P78413 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.14■□□□□ 0.33
IRX4P78413 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
IRX4P78413 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
IRX4P78413 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
IRX4P78413 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
IRX4P78413 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.13■□□□□ 0.33
IRX4P78413 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
IRX4P78413 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
IRX4P78413 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.13■□□□□ 0.33
IRX4P78413 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
IRX4P78413 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
IRX4P78413 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
IRX4P78413 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC17.13■□□□□ 0.33
IRX4P78413 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IRX4P78413 AC092364.2-201ENST00000596710 2692 ntBASIC17.13■□□□□ 0.33
IRX4P78413 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IRX4P78413 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.13■□□□□ 0.33
IRX4P78413 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.13■□□□□ 0.33
IRX4P78413 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
IRX4P78413 FAM86GP-201ENST00000448322 971 ntBASIC17.13■□□□□ 0.33
IRX4P78413 CXCL1P1-201ENST00000502804 216 ntBASIC17.13■□□□□ 0.33
IRX4P78413 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.13■□□□□ 0.33
IRX4P78413 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.13■□□□□ 0.33
IRX4P78413 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.13■□□□□ 0.33
IRX4P78413 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.13■□□□□ 0.33
IRX4P78413 AC068137.2-201ENST00000605408 478 ntBASIC17.13■□□□□ 0.33
IRX4P78413 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.13■□□□□ 0.33
IRX4P78413 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IRX4P78413 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IRX4P78413 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
IRX4P78413 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
IRX4P78413 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IRX4P78413 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
IRX4P78413 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
IRX4P78413 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
IRX4P78413 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IRX4P78413 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
IRX4P78413 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IRX4P78413 TSPY26P-202ENST00000565928 3884 ntBASIC17.13■□□□□ 0.33
IRX4P78413 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IRX4P78413 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IRX4P78413 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IRX4P78413 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.13■□□□□ 0.33
IRX4P78413 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.13■□□□□ 0.33
IRX4P78413 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
IRX4P78413 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IRX4P78413 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IRX4P78413 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IRX4P78413 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
IRX4P78413 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.12■□□□□ 0.33
IRX4P78413 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
IRX4P78413 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.12■□□□□ 0.33
IRX4P78413 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
IRX4P78413 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
IRX4P78413 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
IRX4P78413 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
IRX4P78413 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
IRX4P78413 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.12■□□□□ 0.33
IRX4P78413 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IRX4P78413 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.12■□□□□ 0.33
IRX4P78413 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.12■□□□□ 0.33
IRX4P78413 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IRX4P78413 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IRX4P78413 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
IRX4P78413 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
IRX4P78413 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
IRX4P78413 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
IRX4P78413 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.12■□□□□ 0.33
IRX4P78413 LINC00982-205ENST00000420957 435 ntBASIC17.12■□□□□ 0.33
IRX4P78413 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.12■□□□□ 0.33
IRX4P78413 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
IRX4P78413 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.12■□□□□ 0.33
IRX4P78413 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
IRX4P78413 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.12■□□□□ 0.33
IRX4P78413 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
IRX4P78413 AC190387.1-201ENST00000551683 408 ntBASIC17.12■□□□□ 0.33
IRX4P78413 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.12■□□□□ 0.33
IRX4P78413 AC093520.2-201ENST00000561830 333 ntBASIC17.12■□□□□ 0.33
IRX4P78413 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
IRX4P78413 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
IRX4P78413 AC006449.5-201ENST00000610658 2098 ntBASIC17.12■□□□□ 0.33
IRX4P78413 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
IRX4P78413 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
IRX4P78413 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.12■□□□□ 0.33
IRX4P78413 PI4KAP1-204ENST00000612579 1703 ntBASIC17.12■□□□□ 0.33
IRX4P78413 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
IRX4P78413 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IRX4P78413 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
IRX4P78413 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
IRX4P78413 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
IRX4P78413 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
IRX4P78413 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.11■□□□□ 0.33
IRX4P78413 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IRX4P78413 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IRX4P78413 AL513477.1-201ENST00000602865 2407 ntBASIC17.11■□□□□ 0.33
IRX4P78413 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IRX4P78413 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms