Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.32■□□□□ 0.52
ASIC1P78348 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ASIC1P78348 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
ASIC1P78348 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
ASIC1P78348 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC18.32■□□□□ 0.52
ASIC1P78348 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.32■□□□□ 0.52
ASIC1P78348 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ASIC1P78348 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.32■□□□□ 0.52
ASIC1P78348 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ASIC1P78348 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.32■□□□□ 0.52
ASIC1P78348 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.32■□□□□ 0.52
ASIC1P78348 AC074386.1-202ENST00000463561 864 ntBASIC18.32■□□□□ 0.52
ASIC1P78348 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ASIC1P78348 KRT18P34-201ENST00000488218 1270 ntBASIC18.32■□□□□ 0.52
ASIC1P78348 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.32■□□□□ 0.52
ASIC1P78348 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.32■□□□□ 0.52
ASIC1P78348 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
ASIC1P78348 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.32■□□□□ 0.52
ASIC1P78348 FAM197Y3-203ENST00000618346 717 ntBASIC18.32■□□□□ 0.52
ASIC1P78348 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
ASIC1P78348 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ASIC1P78348 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.32■□□□□ 0.52
ASIC1P78348 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ASIC1P78348 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
ASIC1P78348 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ASIC1P78348 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.32■□□□□ 0.52
ASIC1P78348 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ASIC1P78348 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.32■□□□□ 0.52
ASIC1P78348 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ASIC1P78348 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
ASIC1P78348 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ASIC1P78348 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.32■□□□□ 0.52
ASIC1P78348 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ASIC1P78348 AC008894.3-201ENST00000624324 3103 ntBASIC18.32■□□□□ 0.52
ASIC1P78348 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ASIC1P78348 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ASIC1P78348 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ASIC1P78348 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ASIC1P78348 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
ASIC1P78348 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
ASIC1P78348 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ASIC1P78348 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ASIC1P78348 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
ASIC1P78348 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ASIC1P78348 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC18.31■□□□□ 0.52
ASIC1P78348 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ASIC1P78348 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ASIC1P78348 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ASIC1P78348 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ASIC1P78348 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
ASIC1P78348 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ASIC1P78348 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.31■□□□□ 0.52
ASIC1P78348 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.31■□□□□ 0.52
ASIC1P78348 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.31■□□□□ 0.52
ASIC1P78348 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.31■□□□□ 0.52
ASIC1P78348 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.31■□□□□ 0.52
ASIC1P78348 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ASIC1P78348 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ASIC1P78348 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
ASIC1P78348 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
ASIC1P78348 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ASIC1P78348 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ASIC1P78348 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ASIC1P78348 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ASIC1P78348 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.31■□□□□ 0.52
ASIC1P78348 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ASIC1P78348 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.31■□□□□ 0.52
ASIC1P78348 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.31■□□□□ 0.52
ASIC1P78348 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ASIC1P78348 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ASIC1P78348 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ASIC1P78348 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ASIC1P78348 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC18.3■□□□□ 0.52
ASIC1P78348 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
ASIC1P78348 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ASIC1P78348 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC18.3■□□□□ 0.52
ASIC1P78348 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ASIC1P78348 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
ASIC1P78348 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ASIC1P78348 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC18.3■□□□□ 0.52
ASIC1P78348 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ASIC1P78348 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC18.3■□□□□ 0.52
ASIC1P78348 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ASIC1P78348 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
ASIC1P78348 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ASIC1P78348 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ASIC1P78348 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ASIC1P78348 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ASIC1P78348 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ASIC1P78348 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.3■□□□□ 0.52
ASIC1P78348 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ASIC1P78348 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
ASIC1P78348 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.3■□□□□ 0.52
ASIC1P78348 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.3■□□□□ 0.52
ASIC1P78348 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.3■□□□□ 0.52
ASIC1P78348 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ASIC1P78348 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.3■□□□□ 0.52
ASIC1P78348 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.3■□□□□ 0.52
ASIC1P78348 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC18.3■□□□□ 0.52
ASIC1P78348 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms