Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAB5BP61020 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAB5BP61020 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.85□□□□□ -0.35
RAB5BP61020 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC12.85□□□□□ -0.35
RAB5BP61020 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAB5BP61020 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC12.85□□□□□ -0.35
RAB5BP61020 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAB5BP61020 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC12.85□□□□□ -0.35
RAB5BP61020 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
RAB5BP61020 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC12.85□□□□□ -0.35
RAB5BP61020 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC12.85□□□□□ -0.35
RAB5BP61020 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC12.85□□□□□ -0.35
RAB5BP61020 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC12.85□□□□□ -0.35
RAB5BP61020 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAB5BP61020 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAB5BP61020 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
RAB5BP61020 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAB5BP61020 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAB5BP61020 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RAB5BP61020 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC12.84□□□□□ -0.35
RAB5BP61020 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB5BP61020 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC12.84□□□□□ -0.35
RAB5BP61020 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB5BP61020 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RAB5BP61020 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC12.84□□□□□ -0.35
RAB5BP61020 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB5BP61020 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC12.84□□□□□ -0.35
RAB5BP61020 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB5BP61020 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
RAB5BP61020 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.84□□□□□ -0.35
RAB5BP61020 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
RAB5BP61020 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB5BP61020 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
RAB5BP61020 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
RAB5BP61020 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB5BP61020 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB5BP61020 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB5BP61020 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.84□□□□□ -0.35
RAB5BP61020 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB5BP61020 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
RAB5BP61020 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC12.84□□□□□ -0.35
RAB5BP61020 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB5BP61020 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RAB5BP61020 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB5BP61020 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC12.84□□□□□ -0.35
RAB5BP61020 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC12.84□□□□□ -0.35
RAB5BP61020 DUX4L16-201ENST00000555130 1264 ntBASIC12.84□□□□□ -0.35
RAB5BP61020 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC12.84□□□□□ -0.35
RAB5BP61020 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB5BP61020 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.84□□□□□ -0.35
RAB5BP61020 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB5BP61020 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
RAB5BP61020 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB5BP61020 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB5BP61020 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
RAB5BP61020 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB5BP61020 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB5BP61020 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RAB5BP61020 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.84□□□□□ -0.35
RAB5BP61020 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC12.84□□□□□ -0.35
RAB5BP61020 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB5BP61020 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
RAB5BP61020 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC12.84□□□□□ -0.35
RAB5BP61020 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB5BP61020 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
RAB5BP61020 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
RAB5BP61020 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RAB5BP61020 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
RAB5BP61020 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RAB5BP61020 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB5BP61020 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB5BP61020 PARN-202ENST00000420015 2360 ntTSL 2 BASIC12.84□□□□□ -0.35
RAB5BP61020 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB5BP61020 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
RAB5BP61020 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.35
RAB5BP61020 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
RAB5BP61020 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
RAB5BP61020 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
RAB5BP61020 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
RAB5BP61020 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC12.83□□□□□ -0.36
RAB5BP61020 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB5BP61020 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RAB5BP61020 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.83□□□□□ -0.36
RAB5BP61020 FGD5P1-202ENST00000614866 2498 ntBASIC12.83□□□□□ -0.36
RAB5BP61020 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB5BP61020 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RAB5BP61020 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB5BP61020 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB5BP61020 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB5BP61020 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RAB5BP61020 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
RAB5BP61020 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB5BP61020 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC12.83□□□□□ -0.36
RAB5BP61020 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
RAB5BP61020 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC12.83□□□□□ -0.36
RAB5BP61020 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC12.83□□□□□ -0.36
RAB5BP61020 RARRES2P10-201ENST00000564312 460 ntBASIC12.83□□□□□ -0.36
RAB5BP61020 KRT18P61-201ENST00000585825 1298 ntBASIC12.83□□□□□ -0.36
RAB5BP61020 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
RAB5BP61020 NTF6G-201ENST00000591094 616 ntBASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms