Protein–RNA interactions for Protein: P55196

AFDN, Afadin, humanhuman

Known RBP Predictions only

Length 1,824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AFDNP55196 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
AFDNP55196 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
AFDNP55196 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
AFDNP55196 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
AFDNP55196 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
AFDNP55196 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
AFDNP55196 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
AFDNP55196 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
AFDNP55196 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC20.36■□□□□ 0.85
AFDNP55196 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
AFDNP55196 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
AFDNP55196 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
AFDNP55196 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
AFDNP55196 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
AFDNP55196 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC20.36■□□□□ 0.85
AFDNP55196 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
AFDNP55196 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
AFDNP55196 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
AFDNP55196 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
AFDNP55196 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
AFDNP55196 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
AFDNP55196 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
AFDNP55196 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
AFDNP55196 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
AFDNP55196 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC20.35■□□□□ 0.85
AFDNP55196 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC20.35■□□□□ 0.85
AFDNP55196 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
AFDNP55196 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
AFDNP55196 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
AFDNP55196 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
AFDNP55196 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
AFDNP55196 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
AFDNP55196 PAM16-204ENST00000571941 674 ntTSL 3 BASIC20.35■□□□□ 0.85
AFDNP55196 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
AFDNP55196 MIR8072-201ENST00000614241 80 ntBASIC20.35■□□□□ 0.85
AFDNP55196 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC20.35■□□□□ 0.85
AFDNP55196 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
AFDNP55196 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
AFDNP55196 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
AFDNP55196 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
AFDNP55196 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC20.35■□□□□ 0.85
AFDNP55196 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC20.35■□□□□ 0.85
AFDNP55196 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
AFDNP55196 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
AFDNP55196 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC20.35■□□□□ 0.85
AFDNP55196 PDIA3P1-201ENST00000471856 1510 ntBASIC20.34■□□□□ 0.85
AFDNP55196 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
AFDNP55196 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
AFDNP55196 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
AFDNP55196 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
AFDNP55196 AL355994.2-201ENST00000447882 704 ntBASIC20.34■□□□□ 0.85
AFDNP55196 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC20.34■□□□□ 0.85
AFDNP55196 SDHAP3-202ENST00000515467 728 ntBASIC20.34■□□□□ 0.85
AFDNP55196 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
AFDNP55196 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC20.34■□□□□ 0.85
AFDNP55196 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC20.34■□□□□ 0.85
AFDNP55196 LINC01115-203ENST00000606068 577 ntBASIC20.34■□□□□ 0.85
AFDNP55196 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
AFDNP55196 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
AFDNP55196 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
AFDNP55196 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
AFDNP55196 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC20.34■□□□□ 0.85
AFDNP55196 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC20.34■□□□□ 0.85
AFDNP55196 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
AFDNP55196 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
AFDNP55196 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
AFDNP55196 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
AFDNP55196 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
AFDNP55196 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
AFDNP55196 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
AFDNP55196 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
AFDNP55196 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
AFDNP55196 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC20.34■□□□□ 0.85
AFDNP55196 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC20.34■□□□□ 0.85
AFDNP55196 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
AFDNP55196 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC20.34■□□□□ 0.85
AFDNP55196 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
AFDNP55196 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC20.34■□□□□ 0.85
AFDNP55196 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC20.34■□□□□ 0.85
AFDNP55196 RHOA-206ENST00000454011 889 ntTSL 2 BASIC20.34■□□□□ 0.85
AFDNP55196 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC20.34■□□□□ 0.85
AFDNP55196 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC20.34■□□□□ 0.85
AFDNP55196 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
AFDNP55196 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC20.34■□□□□ 0.85
AFDNP55196 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
AFDNP55196 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
AFDNP55196 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
AFDNP55196 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
AFDNP55196 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
AFDNP55196 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC20.34■□□□□ 0.85
AFDNP55196 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
AFDNP55196 LINC01144-201ENST00000626198 1710 ntBASIC20.34■□□□□ 0.85
AFDNP55196 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC20.33■□□□□ 0.85
AFDNP55196 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
AFDNP55196 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
AFDNP55196 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
AFDNP55196 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
AFDNP55196 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
AFDNP55196 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
AFDNP55196 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms