Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ITGA8P53708 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ITGA8P53708 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.87■□□□□ 0.29
ITGA8P53708 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
ITGA8P53708 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.87■□□□□ 0.29
ITGA8P53708 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ITGA8P53708 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.86■□□□□ 0.29
ITGA8P53708 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ITGA8P53708 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ITGA8P53708 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
ITGA8P53708 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ITGA8P53708 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ITGA8P53708 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
ITGA8P53708 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ITGA8P53708 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ITGA8P53708 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ITGA8P53708 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ITGA8P53708 LAGE3P1-201ENST00000425356 484 ntBASIC16.86■□□□□ 0.29
ITGA8P53708 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.86■□□□□ 0.29
ITGA8P53708 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.86■□□□□ 0.29
ITGA8P53708 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.86■□□□□ 0.29
ITGA8P53708 GGTLC5P-201ENST00000617623 998 ntBASIC16.86■□□□□ 0.29
ITGA8P53708 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.86■□□□□ 0.29
ITGA8P53708 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ITGA8P53708 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ITGA8P53708 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ITGA8P53708 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
ITGA8P53708 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ITGA8P53708 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ITGA8P53708 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
ITGA8P53708 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.86■□□□□ 0.29
ITGA8P53708 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ITGA8P53708 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
ITGA8P53708 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
ITGA8P53708 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
ITGA8P53708 AP003680.1-201ENST00000598970 3660 ntBASIC16.85■□□□□ 0.29
ITGA8P53708 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.85■□□□□ 0.29
ITGA8P53708 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ITGA8P53708 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
ITGA8P53708 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ITGA8P53708 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.85■□□□□ 0.29
ITGA8P53708 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
ITGA8P53708 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
ITGA8P53708 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ITGA8P53708 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
ITGA8P53708 PPT1-215ENST00000641471 2368 ntBASIC16.85■□□□□ 0.29
ITGA8P53708 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
ITGA8P53708 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ITGA8P53708 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
ITGA8P53708 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ITGA8P53708 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.85■□□□□ 0.29
ITGA8P53708 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.85■□□□□ 0.29
ITGA8P53708 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.85■□□□□ 0.29
ITGA8P53708 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
ITGA8P53708 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
ITGA8P53708 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.85■□□□□ 0.29
ITGA8P53708 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ITGA8P53708 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ITGA8P53708 AL121772.3-201ENST00000610840 674 ntBASIC16.85■□□□□ 0.29
ITGA8P53708 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
ITGA8P53708 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.85■□□□□ 0.29
ITGA8P53708 REXO1L6P-202ENST00000619970 1078 ntBASIC16.85■□□□□ 0.29
ITGA8P53708 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.85■□□□□ 0.29
ITGA8P53708 PGM5P2-202ENST00000637225 1043 ntBASIC16.85■□□□□ 0.29
ITGA8P53708 AC107918.4-202ENST00000641623 219 ntBASIC16.85■□□□□ 0.29
ITGA8P53708 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ITGA8P53708 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.85■□□□□ 0.29
ITGA8P53708 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
ITGA8P53708 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ITGA8P53708 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ITGA8P53708 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.85■□□□□ 0.29
ITGA8P53708 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ITGA8P53708 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.85■□□□□ 0.29
ITGA8P53708 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.85■□□□□ 0.29
ITGA8P53708 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ITGA8P53708 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ITGA8P53708 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
ITGA8P53708 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.84■□□□□ 0.29
ITGA8P53708 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ITGA8P53708 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.84■□□□□ 0.29
ITGA8P53708 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ITGA8P53708 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ITGA8P53708 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
ITGA8P53708 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ITGA8P53708 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
ITGA8P53708 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ITGA8P53708 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ITGA8P53708 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
ITGA8P53708 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ITGA8P53708 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ITGA8P53708 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
ITGA8P53708 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.84■□□□□ 0.29
ITGA8P53708 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ITGA8P53708 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ITGA8P53708 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ITGA8P53708 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ITGA8P53708 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.84■□□□□ 0.29
ITGA8P53708 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
ITGA8P53708 DUSP5P1-201ENST00000441325 1139 ntBASIC16.84■□□□□ 0.29
ITGA8P53708 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms