Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LBX1P52954 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LBX1P52954 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
LBX1P52954 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LBX1P52954 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LBX1P52954 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
LBX1P52954 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
LBX1P52954 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.15■□□□□ 0.5
LBX1P52954 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC18.15■□□□□ 0.5
LBX1P52954 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC18.15■□□□□ 0.5
LBX1P52954 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC18.15■□□□□ 0.5
LBX1P52954 GMFG-209ENST00000600322 622 ntTSL 5 BASIC18.15■□□□□ 0.5
LBX1P52954 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC18.15■□□□□ 0.5
LBX1P52954 AC103691.2-201ENST00000618824 433 ntBASIC18.15■□□□□ 0.5
LBX1P52954 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC18.15■□□□□ 0.5
LBX1P52954 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LBX1P52954 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LBX1P52954 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LBX1P52954 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.15■□□□□ 0.5
LBX1P52954 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
LBX1P52954 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
LBX1P52954 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LBX1P52954 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.15■□□□□ 0.5
LBX1P52954 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LBX1P52954 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LBX1P52954 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
LBX1P52954 AL023775.1-201ENST00000454907 1746 ntBASIC18.15■□□□□ 0.5
LBX1P52954 AC093525.9-201ENST00000624961 1746 ntBASIC18.15■□□□□ 0.5
LBX1P52954 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.14■□□□□ 0.5
LBX1P52954 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.14■□□□□ 0.5
LBX1P52954 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
LBX1P52954 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
LBX1P52954 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LBX1P52954 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LBX1P52954 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
LBX1P52954 AC026316.1-201ENST00000398900 414 ntBASIC18.14■□□□□ 0.49
LBX1P52954 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LBX1P52954 AZGP1P1-201ENST00000411909 902 ntBASIC18.14■□□□□ 0.49
LBX1P52954 TOMM22P5-201ENST00000416399 439 ntBASIC18.14■□□□□ 0.49
LBX1P52954 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC18.14■□□□□ 0.49
LBX1P52954 CNN2P10-201ENST00000443067 918 ntBASIC18.14■□□□□ 0.49
LBX1P52954 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LBX1P52954 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
LBX1P52954 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LBX1P52954 AL161670.2-201ENST00000557650 1227 ntBASIC18.14■□□□□ 0.49
LBX1P52954 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC18.14■□□□□ 0.49
LBX1P52954 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC18.14■□□□□ 0.49
LBX1P52954 UBL5-208ENST00000593087 320 ntTSL 3 BASIC18.14■□□□□ 0.49
LBX1P52954 AL805961.1-201ENST00000642026 753 ntBASIC18.14■□□□□ 0.49
LBX1P52954 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LBX1P52954 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.14■□□□□ 0.49
LBX1P52954 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
LBX1P52954 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LBX1P52954 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LBX1P52954 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
LBX1P52954 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.14■□□□□ 0.49
LBX1P52954 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LBX1P52954 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
LBX1P52954 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
LBX1P52954 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LBX1P52954 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.14■□□□□ 0.49
LBX1P52954 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.13■□□□□ 0.49
LBX1P52954 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LBX1P52954 AC006277.1-201ENST00000624348 1610 ntBASIC18.13■□□□□ 0.49
LBX1P52954 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
LBX1P52954 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.13■□□□□ 0.49
LBX1P52954 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.13■□□□□ 0.49
LBX1P52954 SMS-201ENST00000379404 1174 ntTSL 3 BASIC18.13■□□□□ 0.49
LBX1P52954 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LBX1P52954 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC18.13■□□□□ 0.49
LBX1P52954 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
LBX1P52954 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC18.13■□□□□ 0.49
LBX1P52954 IGLV3-15-201ENST00000518356 244 ntBASIC18.13■□□□□ 0.49
LBX1P52954 AP001582.1-201ENST00000525856 295 ntBASIC18.13■□□□□ 0.49
LBX1P52954 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC18.13■□□□□ 0.49
LBX1P52954 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC18.13■□□□□ 0.49
LBX1P52954 PPY2P-201ENST00000582808 702 ntBASIC18.13■□□□□ 0.49
LBX1P52954 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
LBX1P52954 AC127024.7-201ENST00000625101 200 ntBASIC18.13■□□□□ 0.49
LBX1P52954 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
LBX1P52954 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
LBX1P52954 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
LBX1P52954 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LBX1P52954 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.13■□□□□ 0.49
LBX1P52954 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LBX1P52954 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LBX1P52954 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LBX1P52954 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LBX1P52954 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LBX1P52954 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.12■□□□□ 0.49
LBX1P52954 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LBX1P52954 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.12■□□□□ 0.49
LBX1P52954 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LBX1P52954 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LBX1P52954 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LBX1P52954 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
LBX1P52954 TISP43-201ENST00000409793 538 ntTSL 4 BASIC18.12■□□□□ 0.49
LBX1P52954 CD8B2-202ENST00000417670 633 ntBASIC18.12■□□□□ 0.49
LBX1P52954 TARDBPP1-201ENST00000442013 1203 ntBASIC18.12■□□□□ 0.49
LBX1P52954 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms