Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.95□□□□□ -0.02
CENPAP49450 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CENPAP49450 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
CENPAP49450 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.95□□□□□ -0.02
CENPAP49450 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.95□□□□□ -0.02
CENPAP49450 AC021087.4-201ENST00000563761 564 ntBASIC14.95□□□□□ -0.02
CENPAP49450 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CENPAP49450 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
CENPAP49450 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.95□□□□□ -0.02
CENPAP49450 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.95□□□□□ -0.02
CENPAP49450 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CENPAP49450 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
CENPAP49450 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CENPAP49450 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CENPAP49450 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.95□□□□□ -0.02
CENPAP49450 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CENPAP49450 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.95□□□□□ -0.02
CENPAP49450 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CENPAP49450 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.95□□□□□ -0.02
CENPAP49450 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CENPAP49450 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CENPAP49450 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CENPAP49450 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.95□□□□□ -0.02
CENPAP49450 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CENPAP49450 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CENPAP49450 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CENPAP49450 AC006504.4-201ENST00000592118 1568 ntBASIC14.94□□□□□ -0.02
CENPAP49450 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CENPAP49450 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CENPAP49450 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CENPAP49450 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CENPAP49450 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.94□□□□□ -0.02
CENPAP49450 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
CENPAP49450 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CENPAP49450 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CENPAP49450 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
CENPAP49450 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CENPAP49450 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CENPAP49450 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.94□□□□□ -0.02
CENPAP49450 AC087163.2-201ENST00000457299 853 ntBASIC14.94□□□□□ -0.02
CENPAP49450 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.94□□□□□ -0.02
CENPAP49450 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CENPAP49450 AF238378.1-201ENST00000526806 358 ntBASIC14.94□□□□□ -0.02
CENPAP49450 AC006557.2-201ENST00000592985 1240 ntBASIC14.94□□□□□ -0.02
CENPAP49450 CLEC4GP1-201ENST00000596555 870 ntBASIC14.94□□□□□ -0.02
CENPAP49450 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CENPAP49450 IFNL4P1-201ENST00000607083 540 ntBASIC14.94□□□□□ -0.02
CENPAP49450 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CENPAP49450 PID1-202ENST00000392054 2745 ntTSL 2 BASIC14.94□□□□□ -0.02
CENPAP49450 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CENPAP49450 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CENPAP49450 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.94□□□□□ -0.02
CENPAP49450 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.94□□□□□ -0.02
CENPAP49450 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CENPAP49450 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.94□□□□□ -0.02
CENPAP49450 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CENPAP49450 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CENPAP49450 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.94□□□□□ -0.02
CENPAP49450 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.94□□□□□ -0.02
CENPAP49450 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.94□□□□□ -0.02
CENPAP49450 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CENPAP49450 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CENPAP49450 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CENPAP49450 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.94□□□□□ -0.02
CENPAP49450 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CENPAP49450 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.94□□□□□ -0.02
CENPAP49450 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CENPAP49450 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CENPAP49450 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.93□□□□□ -0.02
CENPAP49450 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CENPAP49450 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CENPAP49450 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CENPAP49450 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CENPAP49450 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CENPAP49450 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CENPAP49450 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.93□□□□□ -0.02
CENPAP49450 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CENPAP49450 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
CENPAP49450 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CENPAP49450 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
CENPAP49450 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.93□□□□□ -0.02
CENPAP49450 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CENPAP49450 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.93□□□□□ -0.02
CENPAP49450 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CENPAP49450 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CENPAP49450 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.93□□□□□ -0.02
CENPAP49450 HYMAI-201ENST00000635591 3347 ntBASIC14.93□□□□□ -0.02
CENPAP49450 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.93□□□□□ -0.02
CENPAP49450 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CENPAP49450 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
CENPAP49450 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CENPAP49450 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CENPAP49450 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CENPAP49450 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.93□□□□□ -0.02
CENPAP49450 AKR1C7P-201ENST00000305623 895 ntBASIC14.93□□□□□ -0.02
CENPAP49450 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CENPAP49450 ELK2BP-201ENST00000415014 1224 ntBASIC14.93□□□□□ -0.02
CENPAP49450 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC14.93□□□□□ -0.02
CENPAP49450 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.93□□□□□ -0.02
CENPAP49450 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms