Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.47□□□□□ -0.09
CX3CR1P49238 AL031284.1-201ENST00000419297 478 ntBASIC14.47□□□□□ -0.09
CX3CR1P49238 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CX3CR1P49238 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.47□□□□□ -0.09
CX3CR1P49238 AC098831.1-202ENST00000438821 336 ntBASIC14.47□□□□□ -0.09
CX3CR1P49238 FAM185BP-201ENST00000443595 716 ntBASIC14.47□□□□□ -0.09
CX3CR1P49238 CXCL1P1-201ENST00000502804 216 ntBASIC14.47□□□□□ -0.09
CX3CR1P49238 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.47□□□□□ -0.09
CX3CR1P49238 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.47□□□□□ -0.09
CX3CR1P49238 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.47□□□□□ -0.09
CX3CR1P49238 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
CX3CR1P49238 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CX3CR1P49238 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CX3CR1P49238 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CX3CR1P49238 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CX3CR1P49238 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CX3CR1P49238 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CX3CR1P49238 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CX3CR1P49238 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CX3CR1P49238 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CX3CR1P49238 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CX3CR1P49238 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CX3CR1P49238 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
CX3CR1P49238 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CX3CR1P49238 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
CX3CR1P49238 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC14.47□□□□□ -0.09
CX3CR1P49238 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
CX3CR1P49238 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.46□□□□□ -0.09
CX3CR1P49238 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CX3CR1P49238 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CX3CR1P49238 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CX3CR1P49238 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CX3CR1P49238 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
CX3CR1P49238 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.46□□□□□ -0.09
CX3CR1P49238 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CX3CR1P49238 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.46□□□□□ -0.09
CX3CR1P49238 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CX3CR1P49238 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CX3CR1P49238 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.46□□□□□ -0.09
CX3CR1P49238 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CX3CR1P49238 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
CX3CR1P49238 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
CX3CR1P49238 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CX3CR1P49238 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CX3CR1P49238 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CX3CR1P49238 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CX3CR1P49238 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CX3CR1P49238 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.46□□□□□ -0.09
CX3CR1P49238 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
CX3CR1P49238 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CX3CR1P49238 PRSS29P-201ENST00000440800 595 ntBASIC14.46□□□□□ -0.09
CX3CR1P49238 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.46□□□□□ -0.09
CX3CR1P49238 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC14.46□□□□□ -0.09
CX3CR1P49238 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.46□□□□□ -0.09
CX3CR1P49238 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.46□□□□□ -0.09
CX3CR1P49238 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.46□□□□□ -0.09
CX3CR1P49238 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.46□□□□□ -0.09
CX3CR1P49238 MIR4515-201ENST00000584082 81 ntBASIC14.46□□□□□ -0.09
CX3CR1P49238 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.46□□□□□ -0.09
CX3CR1P49238 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
CX3CR1P49238 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
CX3CR1P49238 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CX3CR1P49238 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
CX3CR1P49238 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.46□□□□□ -0.09
CX3CR1P49238 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CX3CR1P49238 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.46□□□□□ -0.09
CX3CR1P49238 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CX3CR1P49238 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CX3CR1P49238 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CX3CR1P49238 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CX3CR1P49238 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.46□□□□□ -0.09
CX3CR1P49238 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CX3CR1P49238 TSPY26P-202ENST00000565928 3884 ntBASIC14.46□□□□□ -0.1
CX3CR1P49238 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.46□□□□□ -0.1
CX3CR1P49238 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CX3CR1P49238 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
CX3CR1P49238 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CX3CR1P49238 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
CX3CR1P49238 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.46□□□□□ -0.1
CX3CR1P49238 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.46□□□□□ -0.1
CX3CR1P49238 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CX3CR1P49238 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CX3CR1P49238 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.46□□□□□ -0.1
CX3CR1P49238 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CX3CR1P49238 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CX3CR1P49238 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CX3CR1P49238 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CX3CR1P49238 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CX3CR1P49238 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.45□□□□□ -0.1
CX3CR1P49238 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CX3CR1P49238 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
CX3CR1P49238 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CX3CR1P49238 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.45□□□□□ -0.1
CX3CR1P49238 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.45□□□□□ -0.1
CX3CR1P49238 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CX3CR1P49238 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CX3CR1P49238 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
CX3CR1P49238 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CX3CR1P49238 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CX3CR1P49238 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms