Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.11■□□□□ 0.01
SLC9A3P48764 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC9A3P48764 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC9A3P48764 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC9A3P48764 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC9A3P48764 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC9A3P48764 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC9A3P48764 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC9A3P48764 AKR1C7P-201ENST00000305623 895 ntBASIC15.11■□□□□ 0.01
SLC9A3P48764 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.11■□□□□ 0.01
SLC9A3P48764 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SLC9A3P48764 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.11■□□□□ 0.01
SLC9A3P48764 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.11■□□□□ 0.01
SLC9A3P48764 CYP2A7P1-201ENST00000595391 815 ntBASIC15.11■□□□□ 0.01
SLC9A3P48764 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.11■□□□□ 0.01
SLC9A3P48764 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.11■□□□□ 0.01
SLC9A3P48764 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.11■□□□□ 0.01
SLC9A3P48764 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SLC9A3P48764 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.11■□□□□ 0.01
SLC9A3P48764 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLC9A3P48764 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SLC9A3P48764 GGT4P-201ENST00000623672 1708 ntBASIC15.11■□□□□ 0.01
SLC9A3P48764 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLC9A3P48764 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC9A3P48764 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLC9A3P48764 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.11■□□□□ 0.01
SLC9A3P48764 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC9A3P48764 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC9A3P48764 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC9A3P48764 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLC9A3P48764 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.11■□□□□ 0.01
SLC9A3P48764 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLC9A3P48764 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC9A3P48764 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SLC9A3P48764 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
SLC9A3P48764 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
SLC9A3P48764 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC9A3P48764 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.1■□□□□ 0.01
SLC9A3P48764 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC9A3P48764 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC9A3P48764 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC9A3P48764 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
SLC9A3P48764 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.1■□□□□ 0.01
SLC9A3P48764 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC9A3P48764 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SLC9A3P48764 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.1■□□□□ 0.01
SLC9A3P48764 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC9A3P48764 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC9A3P48764 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC9A3P48764 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
SLC9A3P48764 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.1■□□□□ 0.01
SLC9A3P48764 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
SLC9A3P48764 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC9A3P48764 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC9A3P48764 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC9A3P48764 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC9A3P48764 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.1■□□□□ 0.01
SLC9A3P48764 HCG4-201ENST00000418983 998 ntBASIC15.1■□□□□ 0.01
SLC9A3P48764 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.1■□□□□ 0.01
SLC9A3P48764 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.1■□□□□ 0.01
SLC9A3P48764 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.1■□□□□ 0.01
SLC9A3P48764 RPS15P9-201ENST00000494093 319 ntBASIC15.1■□□□□ 0.01
SLC9A3P48764 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.1■□□□□ 0.01
SLC9A3P48764 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.1■□□□□ 0.01
SLC9A3P48764 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.1■□□□□ 0.01
SLC9A3P48764 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC9A3P48764 AC087641.1-201ENST00000557561 1021 ntBASIC15.1■□□□□ 0.01
SLC9A3P48764 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.1■□□□□ 0.01
SLC9A3P48764 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.1■□□□□ 0.01
SLC9A3P48764 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.1■□□□□ 0.01
SLC9A3P48764 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.1■□□□□ 0.01
SLC9A3P48764 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SLC9A3P48764 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
SLC9A3P48764 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC9A3P48764 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SLC9A3P48764 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC9A3P48764 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC9A3P48764 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC9A3P48764 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC9A3P48764 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.1■□□□□ 0.01
SLC9A3P48764 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.1■□□□□ 0.01
SLC9A3P48764 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.1■□□□□ 0.01
SLC9A3P48764 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SLC9A3P48764 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC9A3P48764 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC9A3P48764 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SLC9A3P48764 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.1■□□□□ 0.01
SLC9A3P48764 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SLC9A3P48764 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC9A3P48764 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC9A3P48764 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SLC9A3P48764 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.09■□□□□ 0.01
SLC9A3P48764 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.09■□□□□ 0.01
SLC9A3P48764 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.09■□□□□ 0.01
SLC9A3P48764 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC9A3P48764 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC9A3P48764 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
SLC9A3P48764 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC9A3P48764 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.09■□□□□ 0.01
SLC9A3P48764 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms