Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.49□□□□□ -0.25
NKX2-1P43699 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NKX2-1P43699 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NKX2-1P43699 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NKX2-1P43699 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NKX2-1P43699 MIR648-201ENST00000385046 94 ntBASIC13.49□□□□□ -0.25
NKX2-1P43699 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC13.49□□□□□ -0.25
NKX2-1P43699 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC13.49□□□□□ -0.25
NKX2-1P43699 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC13.49□□□□□ -0.25
NKX2-1P43699 LY6E-213ENST00000522528 606 ntTSL 3 BASIC13.49□□□□□ -0.25
NKX2-1P43699 COX5A-202ENST00000562233 441 ntTSL 3 BASIC13.49□□□□□ -0.25
NKX2-1P43699 COX5A-204ENST00000567270 579 ntTSL 3 BASIC13.49□□□□□ -0.25
NKX2-1P43699 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NKX2-1P43699 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC13.49□□□□□ -0.25
NKX2-1P43699 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC13.49□□□□□ -0.25
NKX2-1P43699 AC006011.2-201ENST00000621313 1158 ntBASIC13.49□□□□□ -0.25
NKX2-1P43699 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NKX2-1P43699 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NKX2-1P43699 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NKX2-1P43699 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NKX2-1P43699 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
NKX2-1P43699 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NKX2-1P43699 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NKX2-1P43699 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
NKX2-1P43699 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NKX2-1P43699 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NKX2-1P43699 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.49□□□□□ -0.25
NKX2-1P43699 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NKX2-1P43699 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
NKX2-1P43699 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC13.48□□□□□ -0.25
NKX2-1P43699 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC13.48□□□□□ -0.25
NKX2-1P43699 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.48□□□□□ -0.25
NKX2-1P43699 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.48□□□□□ -0.25
NKX2-1P43699 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
NKX2-1P43699 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
NKX2-1P43699 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NKX2-1P43699 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NKX2-1P43699 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NKX2-1P43699 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
NKX2-1P43699 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC13.48□□□□□ -0.25
NKX2-1P43699 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.48□□□□□ -0.25
NKX2-1P43699 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NKX2-1P43699 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.48□□□□□ -0.25
NKX2-1P43699 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NKX2-1P43699 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
NKX2-1P43699 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC13.48□□□□□ -0.25
NKX2-1P43699 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC13.48□□□□□ -0.25
NKX2-1P43699 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
NKX2-1P43699 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
NKX2-1P43699 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
NKX2-1P43699 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NKX2-1P43699 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
NKX2-1P43699 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
NKX2-1P43699 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC13.48□□□□□ -0.25
NKX2-1P43699 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NKX2-1P43699 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC13.48□□□□□ -0.25
NKX2-1P43699 AL590326.2-201ENST00000625139 305 ntBASIC13.48□□□□□ -0.25
NKX2-1P43699 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
NKX2-1P43699 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.48□□□□□ -0.25
NKX2-1P43699 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NKX2-1P43699 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.48□□□□□ -0.25
NKX2-1P43699 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NKX2-1P43699 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NKX2-1P43699 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NKX2-1P43699 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NKX2-1P43699 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
NKX2-1P43699 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC13.48□□□□□ -0.25
NKX2-1P43699 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
NKX2-1P43699 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NKX2-1P43699 PC-214ENST00000628663 1470 ntTSL 5 BASIC13.48□□□□□ -0.25
NKX2-1P43699 AC004817.3-201ENST00000602957 2129 ntBASIC13.48□□□□□ -0.25
NKX2-1P43699 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NKX2-1P43699 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NKX2-1P43699 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NKX2-1P43699 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NKX2-1P43699 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
NKX2-1P43699 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.47□□□□□ -0.25
NKX2-1P43699 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC13.47□□□□□ -0.25
NKX2-1P43699 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.47□□□□□ -0.25
NKX2-1P43699 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
NKX2-1P43699 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-1P43699 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-1P43699 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-1P43699 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-1P43699 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-1P43699 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.47□□□□□ -0.25
NKX2-1P43699 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-1P43699 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-1P43699 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-1P43699 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
NKX2-1P43699 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-1P43699 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-1P43699 AL645929.1-201ENST00000420084 975 ntBASIC13.47□□□□□ -0.25
NKX2-1P43699 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC13.47□□□□□ -0.25
NKX2-1P43699 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.47□□□□□ -0.25
NKX2-1P43699 CLN6-204ENST00000564752 900 ntTSL 3 BASIC13.47□□□□□ -0.25
NKX2-1P43699 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC13.47□□□□□ -0.25
NKX2-1P43699 DFFB-212ENST00000625756 649 ntTSL 5 BASIC13.47□□□□□ -0.25
NKX2-1P43699 CLN6-214ENST00000636314 442 ntTSL 3 BASIC13.47□□□□□ -0.25
NKX2-1P43699 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms