Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
RFC3P40938 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.04■□□□□ -0
RFC3P40938 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
RFC3P40938 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.04■□□□□ -0
RFC3P40938 AC142381.1-201ENST00000426099 345 ntBASIC15.04■□□□□ -0
RFC3P40938 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.04■□□□□ -0
RFC3P40938 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.04■□□□□ -0
RFC3P40938 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
RFC3P40938 AC105233.2-201ENST00000523697 349 ntBASIC15.04■□□□□ -0
RFC3P40938 AF228730.5-201ENST00000530288 346 ntBASIC15.04■□□□□ -0
RFC3P40938 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RFC3P40938 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.04■□□□□ -0
RFC3P40938 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.04■□□□□ -0
RFC3P40938 AC013467.2-201ENST00000605472 835 ntBASIC15.04■□□□□ -0
RFC3P40938 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC15.04■□□□□ -0
RFC3P40938 AC003101.2-201ENST00000612557 442 ntBASIC15.04■□□□□ -0
RFC3P40938 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.04■□□□□ -0
RFC3P40938 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RFC3P40938 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
RFC3P40938 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RFC3P40938 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
RFC3P40938 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RFC3P40938 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.04■□□□□ -0
RFC3P40938 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.04■□□□□ -0
RFC3P40938 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
RFC3P40938 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
RFC3P40938 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFC3P40938 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.03■□□□□ -0
RFC3P40938 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFC3P40938 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.03■□□□□ -0
RFC3P40938 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
RFC3P40938 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.03■□□□□ -0
RFC3P40938 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.03■□□□□ -0
RFC3P40938 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.03■□□□□ -0
RFC3P40938 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFC3P40938 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.03■□□□□ -0
RFC3P40938 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.03■□□□□ -0
RFC3P40938 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
RFC3P40938 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
RFC3P40938 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.03■□□□□ -0
RFC3P40938 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.03■□□□□ -0
RFC3P40938 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
RFC3P40938 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFC3P40938 KRT8P39-201ENST00000396270 1433 ntBASIC15.03■□□□□ -0
RFC3P40938 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.03■□□□□ -0
RFC3P40938 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
RFC3P40938 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.03■□□□□ -0
RFC3P40938 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.03■□□□□ -0
RFC3P40938 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFC3P40938 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFC3P40938 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
RFC3P40938 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.03■□□□□ -0
RFC3P40938 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.03■□□□□ -0
RFC3P40938 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
RFC3P40938 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.03■□□□□ -0
RFC3P40938 INGX-202ENST00000489074 768 ntBASIC15.03■□□□□ -0
RFC3P40938 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.03■□□□□ -0
RFC3P40938 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.03■□□□□ -0
RFC3P40938 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.03■□□□□ -0
RFC3P40938 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFC3P40938 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.03■□□□□ -0
RFC3P40938 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.03■□□□□ -0
RFC3P40938 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.03■□□□□ -0
RFC3P40938 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.03■□□□□ -0
RFC3P40938 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.03■□□□□ -0
RFC3P40938 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.03■□□□□ -0
RFC3P40938 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.03■□□□□ -0
RFC3P40938 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.03■□□□□ -0
RFC3P40938 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.03■□□□□ -0
RFC3P40938 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.03■□□□□ -0
RFC3P40938 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
RFC3P40938 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
RFC3P40938 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
RFC3P40938 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFC3P40938 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
RFC3P40938 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
RFC3P40938 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.03■□□□□ -0
RFC3P40938 AC073439.1-201ENST00000624121 1774 ntBASIC15.03■□□□□ -0
RFC3P40938 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.03■□□□□ -0
RFC3P40938 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.03■□□□□ -0
RFC3P40938 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
RFC3P40938 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
RFC3P40938 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.03■□□□□ -0
RFC3P40938 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
RFC3P40938 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
RFC3P40938 AP3S2-216ENST00000617003 1561 ntBASIC15.02■□□□□ -0
RFC3P40938 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.02■□□□□ -0
RFC3P40938 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.02■□□□□ -0
RFC3P40938 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.02■□□□□ -0
RFC3P40938 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
RFC3P40938 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RFC3P40938 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RFC3P40938 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
RFC3P40938 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
RFC3P40938 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
RFC3P40938 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.02■□□□□ -0
RFC3P40938 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.02■□□□□ -0
RFC3P40938 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.02■□□□□ -0
RFC3P40938 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RFC3P40938 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms