Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP24386 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.4■□□□□ 0.06
CHMP24386 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP24386 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.39■□□□□ 0.05
CHMP24386 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP24386 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP24386 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.39■□□□□ 0.05
CHMP24386 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
CHMP24386 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP24386 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP24386 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP24386 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.39■□□□□ 0.05
CHMP24386 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP24386 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP24386 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP24386 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP24386 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP24386 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP24386 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
CHMP24386 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP24386 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.39■□□□□ 0.05
CHMP24386 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.39■□□□□ 0.05
CHMP24386 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.39■□□□□ 0.05
CHMP24386 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP24386 AC092865.5-201ENST00000545435 363 ntBASIC15.39■□□□□ 0.05
CHMP24386 AC096734.2-201ENST00000562054 433 ntBASIC15.39■□□□□ 0.05
CHMP24386 AC002347.1-201ENST00000569543 541 ntBASIC15.39■□□□□ 0.05
CHMP24386 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.39■□□□□ 0.05
CHMP24386 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.39■□□□□ 0.05
CHMP24386 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.39■□□□□ 0.05
CHMP24386 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP24386 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
CHMP24386 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP24386 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP24386 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.39■□□□□ 0.05
CHMP24386 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP24386 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP24386 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP24386 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP24386 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP24386 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP24386 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.39■□□□□ 0.05
CHMP24386 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP24386 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP24386 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP24386 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP24386 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHMP24386 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHMP24386 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.38■□□□□ 0.05
CHMP24386 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CHMP24386 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
CHMP24386 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.38■□□□□ 0.05
CHMP24386 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CHMP24386 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.38■□□□□ 0.05
CHMP24386 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.38■□□□□ 0.05
CHMP24386 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.38■□□□□ 0.05
CHMP24386 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CHMP24386 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHMP24386 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CHMP24386 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CHMP24386 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHMP24386 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CHMP24386 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHMP24386 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CHMP24386 IGLL3P-201ENST00000412472 434 ntBASIC15.38■□□□□ 0.05
CHMP24386 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.38■□□□□ 0.05
CHMP24386 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.38■□□□□ 0.05
CHMP24386 KRT18P2-201ENST00000447938 1258 ntBASIC15.38■□□□□ 0.05
CHMP24386 CXCL1P1-201ENST00000502804 216 ntBASIC15.38■□□□□ 0.05
CHMP24386 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.38■□□□□ 0.05
CHMP24386 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.38■□□□□ 0.05
CHMP24386 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHMP24386 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHMP24386 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.38■□□□□ 0.05
CHMP24386 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CHMP24386 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CHMP24386 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CHMP24386 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHMP24386 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHMP24386 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHMP24386 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CHMP24386 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHMP24386 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.38■□□□□ 0.05
CHMP24386 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CHMP24386 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CHMP24386 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CHMP24386 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CHMP24386 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CHMP24386 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CHMP24386 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CHMP24386 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CHMP24386 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CHMP24386 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.37■□□□□ 0.05
CHMP24386 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CHMP24386 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.37■□□□□ 0.05
CHMP24386 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.37■□□□□ 0.05
CHMP24386 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CHMP24386 KRT8P49-201ENST00000604166 1432 ntBASIC15.37■□□□□ 0.05
CHMP24386 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CHMP24386 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms