Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 HLA-A-202ENST00000376806 1854 ntBASIC14.06□□□□□ -0.16
TNFSF4P23510 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
TNFSF4P23510 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
TNFSF4P23510 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TNFSF4P23510 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TNFSF4P23510 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
TNFSF4P23510 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
TNFSF4P23510 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
TNFSF4P23510 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TNFSF4P23510 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TNFSF4P23510 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
TNFSF4P23510 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.06□□□□□ -0.16
TNFSF4P23510 AP006288.1-201ENST00000446065 395 ntBASIC14.06□□□□□ -0.16
TNFSF4P23510 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.06□□□□□ -0.16
TNFSF4P23510 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.06□□□□□ -0.16
TNFSF4P23510 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TNFSF4P23510 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.06□□□□□ -0.16
TNFSF4P23510 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
TNFSF4P23510 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.06□□□□□ -0.16
TNFSF4P23510 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TNFSF4P23510 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
TNFSF4P23510 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TNFSF4P23510 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.06□□□□□ -0.16
TNFSF4P23510 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.06□□□□□ -0.16
TNFSF4P23510 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.06□□□□□ -0.16
TNFSF4P23510 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
TNFSF4P23510 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.06□□□□□ -0.16
TNFSF4P23510 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TNFSF4P23510 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TNFSF4P23510 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TNFSF4P23510 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TNFSF4P23510 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TNFSF4P23510 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
TNFSF4P23510 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TNFSF4P23510 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.06□□□□□ -0.16
TNFSF4P23510 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TNFSF4P23510 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TNFSF4P23510 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
TNFSF4P23510 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.05□□□□□ -0.16
TNFSF4P23510 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.05□□□□□ -0.16
TNFSF4P23510 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.05□□□□□ -0.16
TNFSF4P23510 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TNFSF4P23510 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TNFSF4P23510 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.05□□□□□ -0.16
TNFSF4P23510 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.05□□□□□ -0.16
TNFSF4P23510 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.05□□□□□ -0.16
TNFSF4P23510 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TNFSF4P23510 AL031731.1-201ENST00000642131 2094 ntBASIC14.05□□□□□ -0.16
TNFSF4P23510 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TNFSF4P23510 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TNFSF4P23510 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TNFSF4P23510 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
TNFSF4P23510 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TNFSF4P23510 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TNFSF4P23510 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TNFSF4P23510 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TNFSF4P23510 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TNFSF4P23510 LINC01144-201ENST00000626198 1710 ntBASIC14.05□□□□□ -0.16
TNFSF4P23510 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
TNFSF4P23510 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TNFSF4P23510 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TNFSF4P23510 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TNFSF4P23510 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TNFSF4P23510 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TNFSF4P23510 RPS8P6-201ENST00000426177 609 ntBASIC14.05□□□□□ -0.16
TNFSF4P23510 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.05□□□□□ -0.16
TNFSF4P23510 AC005237.2-201ENST00000434368 219 ntBASIC14.05□□□□□ -0.16
TNFSF4P23510 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.05□□□□□ -0.16
TNFSF4P23510 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.05□□□□□ -0.16
TNFSF4P23510 KRT8P23-201ENST00000560090 1207 ntBASIC14.05□□□□□ -0.16
TNFSF4P23510 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TNFSF4P23510 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.05□□□□□ -0.16
TNFSF4P23510 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.05□□□□□ -0.16
TNFSF4P23510 AC006538.3-201ENST00000612495 578 ntBASIC14.05□□□□□ -0.16
TNFSF4P23510 AC139530.3-201ENST00000620344 690 ntBASIC14.05□□□□□ -0.16
TNFSF4P23510 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TNFSF4P23510 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
TNFSF4P23510 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TNFSF4P23510 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.05□□□□□ -0.16
TNFSF4P23510 PCGF3-213ENST00000620529 1899 ntBASIC14.05□□□□□ -0.16
TNFSF4P23510 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TNFSF4P23510 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TNFSF4P23510 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TNFSF4P23510 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
TNFSF4P23510 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TNFSF4P23510 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.05□□□□□ -0.16
TNFSF4P23510 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TNFSF4P23510 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TNFSF4P23510 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TNFSF4P23510 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.05□□□□□ -0.16
TNFSF4P23510 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TNFSF4P23510 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.05□□□□□ -0.16
TNFSF4P23510 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TNFSF4P23510 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.05□□□□□ -0.16
TNFSF4P23510 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TNFSF4P23510 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
TNFSF4P23510 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.05□□□□□ -0.16
TNFSF4P23510 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TNFSF4P23510 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TNFSF4P23510 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms