Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
XPAP23025 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
XPAP23025 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
XPAP23025 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
XPAP23025 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.55■□□□□ 0.24
XPAP23025 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
XPAP23025 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
XPAP23025 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.54■□□□□ 0.24
XPAP23025 AD000864.1-201ENST00000624076 2295 ntBASIC16.54■□□□□ 0.24
XPAP23025 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
XPAP23025 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
XPAP23025 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.54■□□□□ 0.24
XPAP23025 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.54■□□□□ 0.24
XPAP23025 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
XPAP23025 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC16.54■□□□□ 0.24
XPAP23025 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.54■□□□□ 0.24
XPAP23025 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
XPAP23025 GGT4P-201ENST00000623672 1708 ntBASIC16.54■□□□□ 0.24
XPAP23025 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
XPAP23025 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
XPAP23025 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.54■□□□□ 0.24
XPAP23025 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
XPAP23025 MIR346-201ENST00000362234 95 ntBASIC16.54■□□□□ 0.24
XPAP23025 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
XPAP23025 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.54■□□□□ 0.24
XPAP23025 SPDYE7P-202ENST00000420373 878 ntBASIC16.54■□□□□ 0.24
XPAP23025 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
XPAP23025 CNN2P2-201ENST00000443536 909 ntBASIC16.54■□□□□ 0.24
XPAP23025 CNN2P3-201ENST00000450201 906 ntBASIC16.54■□□□□ 0.24
XPAP23025 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
XPAP23025 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.54■□□□□ 0.24
XPAP23025 ALG1L8P-201ENST00000533887 760 ntBASIC16.54■□□□□ 0.24
XPAP23025 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.54■□□□□ 0.24
XPAP23025 AC027796.2-201ENST00000575326 344 ntBASIC16.54■□□□□ 0.24
XPAP23025 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.54■□□□□ 0.24
XPAP23025 AL136317.3-201ENST00000618497 906 ntBASIC16.54■□□□□ 0.24
XPAP23025 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
XPAP23025 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
XPAP23025 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.54■□□□□ 0.24
XPAP23025 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
XPAP23025 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
XPAP23025 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
XPAP23025 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.54■□□□□ 0.24
XPAP23025 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
XPAP23025 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.54■□□□□ 0.24
XPAP23025 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
XPAP23025 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
XPAP23025 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
XPAP23025 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
XPAP23025 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
XPAP23025 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
XPAP23025 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.53■□□□□ 0.24
XPAP23025 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
XPAP23025 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
XPAP23025 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
XPAP23025 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
XPAP23025 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
XPAP23025 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
XPAP23025 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
XPAP23025 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.53■□□□□ 0.24
XPAP23025 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
XPAP23025 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
XPAP23025 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
XPAP23025 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
XPAP23025 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
XPAP23025 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
XPAP23025 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.53■□□□□ 0.24
XPAP23025 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.53■□□□□ 0.24
XPAP23025 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.53■□□□□ 0.24
XPAP23025 AC067863.1-201ENST00000494933 530 ntBASIC16.53■□□□□ 0.24
XPAP23025 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.53■□□□□ 0.24
XPAP23025 AC073389.1-201ENST00000595595 795 ntBASIC16.53■□□□□ 0.24
XPAP23025 SPTSSB-204ENST00000617024 1292 ntBASIC16.53■□□□□ 0.24
XPAP23025 MIR6080-201ENST00000617359 66 ntBASIC16.53■□□□□ 0.24
XPAP23025 AP001059.3-201ENST00000619053 235 ntBASIC16.53■□□□□ 0.24
XPAP23025 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
XPAP23025 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
XPAP23025 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
XPAP23025 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.53■□□□□ 0.24
XPAP23025 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
XPAP23025 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.53■□□□□ 0.24
XPAP23025 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
XPAP23025 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
XPAP23025 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
XPAP23025 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.53■□□□□ 0.24
XPAP23025 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
XPAP23025 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
XPAP23025 AC067930.6-201ENST00000623257 4947 ntBASIC16.52■□□□□ 0.24
XPAP23025 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
XPAP23025 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
XPAP23025 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
XPAP23025 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
XPAP23025 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
XPAP23025 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
XPAP23025 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
XPAP23025 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
XPAP23025 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
XPAP23025 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
XPAP23025 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.52■□□□□ 0.24
XPAP23025 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms