Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
RAB4AP20338 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
RAB4AP20338 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB4AP20338 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB4AP20338 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RAB4AP20338 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC12.64□□□□□ -0.39
RAB4AP20338 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
RAB4AP20338 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
RAB4AP20338 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
RAB4AP20338 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC12.64□□□□□ -0.39
RAB4AP20338 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RAB4AP20338 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.64□□□□□ -0.39
RAB4AP20338 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC12.64□□□□□ -0.39
RAB4AP20338 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC12.64□□□□□ -0.39
RAB4AP20338 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB4AP20338 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RAB4AP20338 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
RAB4AP20338 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB4AP20338 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB4AP20338 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RAB4AP20338 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
RAB4AP20338 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
RAB4AP20338 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB4AP20338 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
RAB4AP20338 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC12.64□□□□□ -0.39
RAB4AP20338 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RAB4AP20338 ADM-205ENST00000528544 586 ntTSL 2 BASIC12.64□□□□□ -0.39
RAB4AP20338 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB4AP20338 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC12.64□□□□□ -0.39
RAB4AP20338 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RAB4AP20338 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
RAB4AP20338 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB4AP20338 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RAB4AP20338 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC12.64□□□□□ -0.39
RAB4AP20338 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB4AP20338 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
RAB4AP20338 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB4AP20338 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RAB4AP20338 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB4AP20338 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RAB4AP20338 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RAB4AP20338 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC12.64□□□□□ -0.39
RAB4AP20338 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC12.64□□□□□ -0.39
RAB4AP20338 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
RAB4AP20338 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB4AP20338 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC12.64□□□□□ -0.39
RAB4AP20338 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC12.64□□□□□ -0.39
RAB4AP20338 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB4AP20338 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RAB4AP20338 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC12.64□□□□□ -0.39
RAB4AP20338 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB4AP20338 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB4AP20338 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB4AP20338 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB4AP20338 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB4AP20338 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB4AP20338 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
RAB4AP20338 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB4AP20338 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB4AP20338 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB4AP20338 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC12.63□□□□□ -0.39
RAB4AP20338 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB4AP20338 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB4AP20338 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB4AP20338 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB4AP20338 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
RAB4AP20338 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB4AP20338 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
RAB4AP20338 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC12.63□□□□□ -0.39
RAB4AP20338 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
RAB4AP20338 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC12.63□□□□□ -0.39
RAB4AP20338 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC12.63□□□□□ -0.39
RAB4AP20338 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB4AP20338 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
RAB4AP20338 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC12.63□□□□□ -0.39
RAB4AP20338 PVRIG2P-201ENST00000435460 978 ntBASIC12.63□□□□□ -0.39
RAB4AP20338 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC12.63□□□□□ -0.39
RAB4AP20338 APTR-205ENST00000447009 902 ntTSL 2 BASIC12.63□□□□□ -0.39
RAB4AP20338 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC12.63□□□□□ -0.39
RAB4AP20338 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC12.63□□□□□ -0.39
RAB4AP20338 RPPH1-201ENST00000516869 333 ntBASIC12.63□□□□□ -0.39
RAB4AP20338 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB4AP20338 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
RAB4AP20338 BX088651.1-201ENST00000540551 451 ntBASIC12.63□□□□□ -0.39
RAB4AP20338 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC12.63□□□□□ -0.39
RAB4AP20338 AP005242.2-201ENST00000580065 1175 ntBASIC12.63□□□□□ -0.39
RAB4AP20338 TK1-204ENST00000590430 683 ntTSL 3 BASIC12.63□□□□□ -0.39
RAB4AP20338 AC006058.3-201ENST00000606217 1069 ntBASIC12.63□□□□□ -0.39
RAB4AP20338 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB4AP20338 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB4AP20338 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
RAB4AP20338 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC12.63□□□□□ -0.39
RAB4AP20338 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
RAB4AP20338 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB4AP20338 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
RAB4AP20338 CICP8-201ENST00000455800 2813 ntBASIC12.63□□□□□ -0.39
RAB4AP20338 REXO1L1P-201ENST00000379010 6598 ntBASIC12.63□□□□□ -0.39
RAB4AP20338 POLL-217ENST00000628479 1953 ntTSL 5 BASIC12.63□□□□□ -0.39
RAB4AP20338 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RAB4AP20338 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms