Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
DEFA4P12838 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
DEFA4P12838 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC13.42□□□□□ -0.26
DEFA4P12838 HNRNPRP1-201ENST00000453465 1695 ntBASIC13.42□□□□□ -0.26
DEFA4P12838 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC13.42□□□□□ -0.26
DEFA4P12838 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC13.42□□□□□ -0.26
DEFA4P12838 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
DEFA4P12838 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
DEFA4P12838 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
DEFA4P12838 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
DEFA4P12838 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
DEFA4P12838 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC13.42□□□□□ -0.26
DEFA4P12838 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC13.42□□□□□ -0.26
DEFA4P12838 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.42□□□□□ -0.26
DEFA4P12838 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
DEFA4P12838 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC13.42□□□□□ -0.26
DEFA4P12838 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
DEFA4P12838 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC13.42□□□□□ -0.26
DEFA4P12838 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.42□□□□□ -0.26
DEFA4P12838 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC13.42□□□□□ -0.26
DEFA4P12838 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
DEFA4P12838 FOS-208ENST00000555686 1496 ntTSL 2 BASIC13.42□□□□□ -0.26
DEFA4P12838 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
DEFA4P12838 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC13.41□□□□□ -0.26
DEFA4P12838 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
DEFA4P12838 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.41□□□□□ -0.26
DEFA4P12838 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.41□□□□□ -0.26
DEFA4P12838 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
DEFA4P12838 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
DEFA4P12838 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC13.41□□□□□ -0.26
DEFA4P12838 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.41□□□□□ -0.26
DEFA4P12838 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
DEFA4P12838 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
DEFA4P12838 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
DEFA4P12838 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
DEFA4P12838 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
DEFA4P12838 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
DEFA4P12838 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC13.41□□□□□ -0.26
DEFA4P12838 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC13.41□□□□□ -0.26
DEFA4P12838 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.26
DEFA4P12838 SAPCD2P3-201ENST00000455031 850 ntBASIC13.41□□□□□ -0.26
DEFA4P12838 SDHD-206ENST00000528182 754 ntTSL 3 BASIC13.41□□□□□ -0.26
DEFA4P12838 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
DEFA4P12838 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC13.41□□□□□ -0.26
DEFA4P12838 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC13.41□□□□□ -0.26
DEFA4P12838 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC13.41□□□□□ -0.26
DEFA4P12838 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC13.41□□□□□ -0.26
DEFA4P12838 MTDHP4-201ENST00000600287 670 ntBASIC13.41□□□□□ -0.26
DEFA4P12838 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
DEFA4P12838 AL353135.1-201ENST00000606729 504 ntBASIC13.41□□□□□ -0.26
DEFA4P12838 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC13.41□□□□□ -0.26
DEFA4P12838 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
DEFA4P12838 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
DEFA4P12838 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
DEFA4P12838 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
DEFA4P12838 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
DEFA4P12838 AC243591.1-201ENST00000452967 1364 ntBASIC13.41□□□□□ -0.26
DEFA4P12838 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
DEFA4P12838 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
DEFA4P12838 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
DEFA4P12838 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
DEFA4P12838 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
DEFA4P12838 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
DEFA4P12838 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
DEFA4P12838 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC13.41□□□□□ -0.26
DEFA4P12838 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
DEFA4P12838 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
DEFA4P12838 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
DEFA4P12838 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
DEFA4P12838 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
DEFA4P12838 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.41□□□□□ -0.26
DEFA4P12838 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
DEFA4P12838 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC13.4□□□□□ -0.26
DEFA4P12838 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
DEFA4P12838 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC13.4□□□□□ -0.26
DEFA4P12838 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
DEFA4P12838 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
DEFA4P12838 AL590787.1-201ENST00000568856 1315 ntBASIC13.4□□□□□ -0.26
DEFA4P12838 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
DEFA4P12838 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.4□□□□□ -0.26
DEFA4P12838 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
DEFA4P12838 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
DEFA4P12838 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
DEFA4P12838 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
DEFA4P12838 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
DEFA4P12838 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
DEFA4P12838 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
DEFA4P12838 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
DEFA4P12838 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
DEFA4P12838 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.4□□□□□ -0.26
DEFA4P12838 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
DEFA4P12838 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
DEFA4P12838 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
DEFA4P12838 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
DEFA4P12838 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
DEFA4P12838 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
DEFA4P12838 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
DEFA4P12838 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
DEFA4P12838 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC13.4□□□□□ -0.26
DEFA4P12838 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms