Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.81■□□□□ 0.6
BMP3P12645 ZNF890P-202ENST00000530367 1156 ntBASIC18.81■□□□□ 0.6
BMP3P12645 AC010336.2-201ENST00000564226 506 ntBASIC18.81■□□□□ 0.6
BMP3P12645 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
BMP3P12645 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC18.81■□□□□ 0.6
BMP3P12645 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.81■□□□□ 0.6
BMP3P12645 AC004840.1-201ENST00000636359 365 ntBASIC18.81■□□□□ 0.6
BMP3P12645 AF228730.6-201ENST00000641497 218 ntBASIC18.81■□□□□ 0.6
BMP3P12645 AC084121.3-201ENST00000641716 218 ntBASIC18.81■□□□□ 0.6
BMP3P12645 AC105233.6-201ENST00000642093 218 ntBASIC18.81■□□□□ 0.6
BMP3P12645 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BMP3P12645 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.81■□□□□ 0.6
BMP3P12645 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.81■□□□□ 0.6
BMP3P12645 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BMP3P12645 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BMP3P12645 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BMP3P12645 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BMP3P12645 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BMP3P12645 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.81■□□□□ 0.6
BMP3P12645 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BMP3P12645 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
BMP3P12645 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BMP3P12645 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BMP3P12645 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
BMP3P12645 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BMP3P12645 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
BMP3P12645 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BMP3P12645 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
BMP3P12645 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
BMP3P12645 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.8■□□□□ 0.6
BMP3P12645 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
BMP3P12645 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
BMP3P12645 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BMP3P12645 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BMP3P12645 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.8■□□□□ 0.6
BMP3P12645 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.8■□□□□ 0.6
BMP3P12645 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.8■□□□□ 0.6
BMP3P12645 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BMP3P12645 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.8■□□□□ 0.6
BMP3P12645 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.8■□□□□ 0.6
BMP3P12645 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
BMP3P12645 AC004233.3-201ENST00000607794 1269 ntBASIC18.8■□□□□ 0.6
BMP3P12645 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BMP3P12645 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
BMP3P12645 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.8■□□□□ 0.6
BMP3P12645 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BMP3P12645 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BMP3P12645 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BMP3P12645 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BMP3P12645 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.8■□□□□ 0.6
BMP3P12645 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
BMP3P12645 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.8■□□□□ 0.6
BMP3P12645 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BMP3P12645 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
BMP3P12645 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BMP3P12645 AL592424.1-201ENST00000563624 1536 ntBASIC18.79■□□□□ 0.6
BMP3P12645 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
BMP3P12645 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
BMP3P12645 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BMP3P12645 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.79■□□□□ 0.6
BMP3P12645 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
BMP3P12645 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BMP3P12645 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BMP3P12645 PIN1P1-201ENST00000412108 996 ntBASIC18.79■□□□□ 0.6
BMP3P12645 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
BMP3P12645 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.79■□□□□ 0.6
BMP3P12645 CRB3P1-201ENST00000449338 276 ntBASIC18.79■□□□□ 0.6
BMP3P12645 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BMP3P12645 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18.79■□□□□ 0.6
BMP3P12645 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BMP3P12645 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
BMP3P12645 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BMP3P12645 AL033527.5-202ENST00000641632 1098 ntBASIC18.79■□□□□ 0.6
BMP3P12645 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BMP3P12645 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.79■□□□□ 0.6
BMP3P12645 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BMP3P12645 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
BMP3P12645 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
BMP3P12645 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BMP3P12645 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
BMP3P12645 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
BMP3P12645 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
BMP3P12645 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
BMP3P12645 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BMP3P12645 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BMP3P12645 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BMP3P12645 BTBD7P1-201ENST00000447253 1453 ntBASIC18.78■□□□□ 0.6
BMP3P12645 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.78■□□□□ 0.6
BMP3P12645 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BMP3P12645 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BMP3P12645 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.78■□□□□ 0.6
BMP3P12645 AL136982.4-201ENST00000437689 1740 ntBASIC18.78■□□□□ 0.6
BMP3P12645 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BMP3P12645 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BMP3P12645 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
BMP3P12645 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
BMP3P12645 AGGF1P2-201ENST00000426656 2106 ntBASIC18.78■□□□□ 0.6
BMP3P12645 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC18.78■□□□□ 0.6
BMP3P12645 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.78■□□□□ 0.6
BMP3P12645 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms