Protein–RNA interactions for Protein: P10072

HKR1, Krueppel-related zinc finger protein 1, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HKR1P10072 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HKR1P10072 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HKR1P10072 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HKR1P10072 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
HKR1P10072 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC13.97□□□□□ -0.17
HKR1P10072 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HKR1P10072 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
HKR1P10072 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HKR1P10072 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
HKR1P10072 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HKR1P10072 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC13.97□□□□□ -0.17
HKR1P10072 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
HKR1P10072 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
HKR1P10072 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HKR1P10072 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HKR1P10072 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC13.97□□□□□ -0.17
HKR1P10072 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
HKR1P10072 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HKR1P10072 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
HKR1P10072 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.97□□□□□ -0.17
HKR1P10072 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HKR1P10072 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC13.97□□□□□ -0.17
HKR1P10072 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HKR1P10072 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC13.97□□□□□ -0.17
HKR1P10072 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC13.97□□□□□ -0.17
HKR1P10072 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
HKR1P10072 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HKR1P10072 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC13.97□□□□□ -0.17
HKR1P10072 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13.97□□□□□ -0.17
HKR1P10072 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HKR1P10072 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HKR1P10072 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.97□□□□□ -0.17
HKR1P10072 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
HKR1P10072 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
HKR1P10072 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
HKR1P10072 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
HKR1P10072 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
HKR1P10072 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.97□□□□□ -0.17
HKR1P10072 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC13.97□□□□□ -0.17
HKR1P10072 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HKR1P10072 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC13.96□□□□□ -0.17
HKR1P10072 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HKR1P10072 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HKR1P10072 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
HKR1P10072 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC13.96□□□□□ -0.17
HKR1P10072 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
HKR1P10072 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HKR1P10072 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HKR1P10072 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC13.96□□□□□ -0.17
HKR1P10072 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HKR1P10072 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
HKR1P10072 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
HKR1P10072 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
HKR1P10072 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HKR1P10072 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.96□□□□□ -0.17
HKR1P10072 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC13.96□□□□□ -0.17
HKR1P10072 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.96□□□□□ -0.17
HKR1P10072 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.96□□□□□ -0.17
HKR1P10072 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HKR1P10072 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.96□□□□□ -0.17
HKR1P10072 CNN2P11-201ENST00000429351 262 ntBASIC13.96□□□□□ -0.17
HKR1P10072 MKNK2P1-201ENST00000437526 628 ntBASIC13.96□□□□□ -0.17
HKR1P10072 ALG1L5P-201ENST00000482043 771 ntBASIC13.96□□□□□ -0.17
HKR1P10072 AC002558.1-201ENST00000488906 803 ntBASIC13.96□□□□□ -0.17
HKR1P10072 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC13.96□□□□□ -0.17
HKR1P10072 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HKR1P10072 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC13.96□□□□□ -0.17
HKR1P10072 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HKR1P10072 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC13.96□□□□□ -0.17
HKR1P10072 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
HKR1P10072 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC13.96□□□□□ -0.17
HKR1P10072 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
HKR1P10072 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
HKR1P10072 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC13.96□□□□□ -0.17
HKR1P10072 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
HKR1P10072 AC004706.3-202ENST00000621574 984 ntBASIC13.96□□□□□ -0.17
HKR1P10072 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.96□□□□□ -0.17
HKR1P10072 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HKR1P10072 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
HKR1P10072 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
HKR1P10072 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
HKR1P10072 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
HKR1P10072 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HKR1P10072 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HKR1P10072 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
HKR1P10072 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
HKR1P10072 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
HKR1P10072 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
HKR1P10072 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HKR1P10072 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.96□□□□□ -0.18
HKR1P10072 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
HKR1P10072 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.96□□□□□ -0.18
HKR1P10072 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HKR1P10072 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HKR1P10072 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC13.96□□□□□ -0.18
HKR1P10072 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
HKR1P10072 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HKR1P10072 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.95□□□□□ -0.18
HKR1P10072 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HKR1P10072 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms