Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FAM228BP0C875 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FAM228BP0C875 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FAM228BP0C875 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.49■□□□□ 0.39
FAM228BP0C875 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FAM228BP0C875 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.49■□□□□ 0.39
FAM228BP0C875 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
FAM228BP0C875 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FAM228BP0C875 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FAM228BP0C875 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FAM228BP0C875 AC073347.1-201ENST00000421633 2643 ntBASIC17.49■□□□□ 0.39
FAM228BP0C875 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
FAM228BP0C875 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FAM228BP0C875 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FAM228BP0C875 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FAM228BP0C875 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.48■□□□□ 0.39
FAM228BP0C875 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.48■□□□□ 0.39
FAM228BP0C875 DBET-201ENST00000630918 3363 ntBASIC17.48■□□□□ 0.39
FAM228BP0C875 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FAM228BP0C875 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FAM228BP0C875 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
FAM228BP0C875 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.48■□□□□ 0.39
FAM228BP0C875 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FAM228BP0C875 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.48■□□□□ 0.39
FAM228BP0C875 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
FAM228BP0C875 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
FAM228BP0C875 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FAM228BP0C875 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
FAM228BP0C875 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
FAM228BP0C875 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FAM228BP0C875 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
FAM228BP0C875 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.48■□□□□ 0.39
FAM228BP0C875 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
FAM228BP0C875 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
FAM228BP0C875 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.48■□□□□ 0.39
FAM228BP0C875 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.48■□□□□ 0.39
FAM228BP0C875 VN2R19P-201ENST00000442399 1052 ntBASIC17.48■□□□□ 0.39
FAM228BP0C875 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.48■□□□□ 0.39
FAM228BP0C875 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.48■□□□□ 0.39
FAM228BP0C875 AC104692.2-201ENST00000603054 253 ntBASIC17.48■□□□□ 0.39
FAM228BP0C875 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.48■□□□□ 0.39
FAM228BP0C875 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
FAM228BP0C875 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.48■□□□□ 0.39
FAM228BP0C875 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
FAM228BP0C875 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.48■□□□□ 0.39
FAM228BP0C875 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
FAM228BP0C875 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
FAM228BP0C875 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
FAM228BP0C875 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
FAM228BP0C875 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
FAM228BP0C875 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
FAM228BP0C875 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.48■□□□□ 0.39
FAM228BP0C875 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
FAM228BP0C875 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
FAM228BP0C875 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FAM228BP0C875 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
FAM228BP0C875 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FAM228BP0C875 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.47■□□□□ 0.39
FAM228BP0C875 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
FAM228BP0C875 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
FAM228BP0C875 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.47■□□□□ 0.39
FAM228BP0C875 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FAM228BP0C875 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FAM228BP0C875 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FAM228BP0C875 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.47■□□□□ 0.39
FAM228BP0C875 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.47■□□□□ 0.39
FAM228BP0C875 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.47■□□□□ 0.39
FAM228BP0C875 AL031284.1-201ENST00000419297 478 ntBASIC17.47■□□□□ 0.39
FAM228BP0C875 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.47■□□□□ 0.39
FAM228BP0C875 AC009947.1-201ENST00000444350 727 ntBASIC17.47■□□□□ 0.39
FAM228BP0C875 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
FAM228BP0C875 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.47■□□□□ 0.39
FAM228BP0C875 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
FAM228BP0C875 UNC93B6-202ENST00000528242 690 ntBASIC17.47■□□□□ 0.39
FAM228BP0C875 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.47■□□□□ 0.39
FAM228BP0C875 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.47■□□□□ 0.39
FAM228BP0C875 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.47■□□□□ 0.39
FAM228BP0C875 AL773604.1-201ENST00000617417 272 ntBASIC17.47■□□□□ 0.39
FAM228BP0C875 AC116407.3-201ENST00000623905 1129 ntBASIC17.47■□□□□ 0.39
FAM228BP0C875 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.47■□□□□ 0.39
FAM228BP0C875 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
FAM228BP0C875 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FAM228BP0C875 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.47■□□□□ 0.39
FAM228BP0C875 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FAM228BP0C875 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
FAM228BP0C875 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FAM228BP0C875 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
FAM228BP0C875 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FAM228BP0C875 AC013268.4-201ENST00000637413 2228 ntBASIC17.47■□□□□ 0.39
FAM228BP0C875 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FAM228BP0C875 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
FAM228BP0C875 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FAM228BP0C875 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
FAM228BP0C875 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FAM228BP0C875 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.46■□□□□ 0.39
FAM228BP0C875 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FAM228BP0C875 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FAM228BP0C875 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FAM228BP0C875 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FAM228BP0C875 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms