Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
TPM2P07951 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TPM2P07951 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
TPM2P07951 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.74■□□□□ 0.59
TPM2P07951 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
TPM2P07951 TOB2P1-201ENST00000469761 992 ntBASIC18.74■□□□□ 0.59
TPM2P07951 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.74■□□□□ 0.59
TPM2P07951 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.74■□□□□ 0.59
TPM2P07951 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.74■□□□□ 0.59
TPM2P07951 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TPM2P07951 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
TPM2P07951 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TPM2P07951 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TPM2P07951 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
TPM2P07951 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
TPM2P07951 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TPM2P07951 NSUN5P1-202ENST00000421140 1535 ntBASIC18.74■□□□□ 0.59
TPM2P07951 NSUN5P2-203ENST00000457352 1529 ntBASIC18.74■□□□□ 0.59
TPM2P07951 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TPM2P07951 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.74■□□□□ 0.59
TPM2P07951 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TPM2P07951 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TPM2P07951 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TPM2P07951 CICP24-201ENST00000605464 2705 ntBASIC18.73■□□□□ 0.59
TPM2P07951 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TPM2P07951 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TPM2P07951 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC18.73■□□□□ 0.59
TPM2P07951 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TPM2P07951 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TPM2P07951 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TPM2P07951 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC18.73■□□□□ 0.59
TPM2P07951 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC18.73■□□□□ 0.59
TPM2P07951 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
TPM2P07951 AL359183.1-201ENST00000623796 2132 ntBASIC18.73■□□□□ 0.59
TPM2P07951 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TPM2P07951 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC18.73■□□□□ 0.59
TPM2P07951 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TPM2P07951 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TPM2P07951 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TPM2P07951 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.73■□□□□ 0.59
TPM2P07951 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.73■□□□□ 0.59
TPM2P07951 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.73■□□□□ 0.59
TPM2P07951 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TPM2P07951 LINC00265-3P-201ENST00000447588 903 ntBASIC18.73■□□□□ 0.59
TPM2P07951 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.73■□□□□ 0.59
TPM2P07951 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.73■□□□□ 0.59
TPM2P07951 FAM86EP-206ENST00000510506 987 ntBASIC18.73■□□□□ 0.59
TPM2P07951 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TPM2P07951 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.73■□□□□ 0.59
TPM2P07951 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TPM2P07951 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TPM2P07951 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TPM2P07951 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TPM2P07951 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
TPM2P07951 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC18.73■□□□□ 0.59
TPM2P07951 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC18.73■□□□□ 0.59
TPM2P07951 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
TPM2P07951 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.73■□□□□ 0.59
TPM2P07951 PPP1R26P4-201ENST00000619065 3527 ntBASIC18.73■□□□□ 0.59
TPM2P07951 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
TPM2P07951 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TPM2P07951 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TPM2P07951 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TPM2P07951 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TPM2P07951 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC18.72■□□□□ 0.59
TPM2P07951 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TPM2P07951 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC18.72■□□□□ 0.59
TPM2P07951 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.72■□□□□ 0.59
TPM2P07951 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TPM2P07951 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TPM2P07951 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TPM2P07951 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TPM2P07951 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.72■□□□□ 0.59
TPM2P07951 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TPM2P07951 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TPM2P07951 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TPM2P07951 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TPM2P07951 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TPM2P07951 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TPM2P07951 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TPM2P07951 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TPM2P07951 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TPM2P07951 POM121L3P-201ENST00000419331 1163 ntBASIC18.72■□□□□ 0.59
TPM2P07951 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.72■□□□□ 0.59
TPM2P07951 TPSP2-201ENST00000561760 610 ntBASIC18.72■□□□□ 0.59
TPM2P07951 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.72■□□□□ 0.59
TPM2P07951 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.72■□□□□ 0.59
TPM2P07951 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TPM2P07951 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.72■□□□□ 0.59
TPM2P07951 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TPM2P07951 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TPM2P07951 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TPM2P07951 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TPM2P07951 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.72■□□□□ 0.59
TPM2P07951 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TPM2P07951 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TPM2P07951 ALOX12P2-203ENST00000570921 1945 ntBASIC18.72■□□□□ 0.59
TPM2P07951 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TPM2P07951 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
TPM2P07951 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms