Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC13.19□□□□□ -0.3
APOC3P02656 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC13.19□□□□□ -0.3
APOC3P02656 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC13.19□□□□□ -0.3
APOC3P02656 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC13.19□□□□□ -0.3
APOC3P02656 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
APOC3P02656 TBC1D3P2-202ENST00000577902 1649 ntBASIC13.19□□□□□ -0.3
APOC3P02656 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC13.19□□□□□ -0.3
APOC3P02656 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
APOC3P02656 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOC3P02656 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOC3P02656 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOC3P02656 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.19□□□□□ -0.3
APOC3P02656 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOC3P02656 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOC3P02656 AC131212.3-201ENST00000624087 4219 ntBASIC13.19□□□□□ -0.3
APOC3P02656 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC13.19□□□□□ -0.3
APOC3P02656 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
APOC3P02656 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOC3P02656 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
APOC3P02656 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOC3P02656 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.19□□□□□ -0.3
APOC3P02656 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOC3P02656 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOC3P02656 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
APOC3P02656 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
APOC3P02656 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.18□□□□□ -0.3
APOC3P02656 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.18□□□□□ -0.3
APOC3P02656 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOC3P02656 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOC3P02656 PEG13-201ENST00000631594 5667 ntBASIC13.18□□□□□ -0.3
APOC3P02656 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOC3P02656 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
APOC3P02656 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOC3P02656 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
APOC3P02656 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOC3P02656 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
APOC3P02656 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOC3P02656 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
APOC3P02656 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
APOC3P02656 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC13.18□□□□□ -0.3
APOC3P02656 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC13.18□□□□□ -0.3
APOC3P02656 ABHD17AP6-201ENST00000458502 1044 ntBASIC13.18□□□□□ -0.3
APOC3P02656 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
APOC3P02656 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
APOC3P02656 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC13.18□□□□□ -0.3
APOC3P02656 RHOF-204ENST00000537265 699 ntTSL 2 BASIC13.18□□□□□ -0.3
APOC3P02656 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
APOC3P02656 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
APOC3P02656 CKBP1-201ENST00000565489 1086 ntBASIC13.18□□□□□ -0.3
APOC3P02656 MIR3180-5-201ENST00000583743 153 ntBASIC13.18□□□□□ -0.3
APOC3P02656 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOC3P02656 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC13.18□□□□□ -0.3
APOC3P02656 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC13.18□□□□□ -0.3
APOC3P02656 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.18□□□□□ -0.3
APOC3P02656 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC13.18□□□□□ -0.3
APOC3P02656 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOC3P02656 REXO1L8P-201ENST00000604378 1897 ntBASIC13.18□□□□□ -0.3
APOC3P02656 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.18□□□□□ -0.3
APOC3P02656 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOC3P02656 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
APOC3P02656 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.18□□□□□ -0.3
APOC3P02656 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
APOC3P02656 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
APOC3P02656 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOC3P02656 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC13.18□□□□□ -0.3
APOC3P02656 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC13.18□□□□□ -0.3
APOC3P02656 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOC3P02656 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
APOC3P02656 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.18□□□□□ -0.3
APOC3P02656 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
APOC3P02656 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
APOC3P02656 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.18□□□□□ -0.3
APOC3P02656 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
APOC3P02656 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOC3P02656 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOC3P02656 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
APOC3P02656 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.17□□□□□ -0.3
APOC3P02656 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC13.17□□□□□ -0.3
APOC3P02656 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
APOC3P02656 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC13.17□□□□□ -0.3
APOC3P02656 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
APOC3P02656 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOC3P02656 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.17□□□□□ -0.3
APOC3P02656 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
APOC3P02656 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOC3P02656 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.17□□□□□ -0.3
APOC3P02656 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
APOC3P02656 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOC3P02656 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC13.17□□□□□ -0.3
APOC3P02656 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOC3P02656 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOC3P02656 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC13.17□□□□□ -0.3
APOC3P02656 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
APOC3P02656 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOC3P02656 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC13.17□□□□□ -0.3
APOC3P02656 KRT18P23-201ENST00000435622 1283 ntBASIC13.17□□□□□ -0.3
APOC3P02656 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC13.17□□□□□ -0.3
APOC3P02656 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
APOC3P02656 OR10C1-204ENST00000622521 1039 ntBASIC13.17□□□□□ -0.3
APOC3P02656 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms