Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DQA1P01909 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC12.39□□□□□ -0.43
HLA-DQA1P01909 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC12.39□□□□□ -0.43
HLA-DQA1P01909 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DQA1P01909 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DQA1P01909 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DQA1P01909 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DQA1P01909 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DQA1P01909 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DQA1P01909 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DQA1P01909 DDT-203ENST00000403754 569 ntTSL 3 BASIC12.39□□□□□ -0.43
HLA-DQA1P01909 DDT-206ENST00000430101 573 ntTSL 2 BASIC12.39□□□□□ -0.43
HLA-DQA1P01909 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC12.39□□□□□ -0.43
HLA-DQA1P01909 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
HLA-DQA1P01909 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC12.39□□□□□ -0.43
HLA-DQA1P01909 AL512604.3-201ENST00000569583 964 ntBASIC12.39□□□□□ -0.43
HLA-DQA1P01909 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC12.39□□□□□ -0.43
HLA-DQA1P01909 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DQA1P01909 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC12.39□□□□□ -0.43
HLA-DQA1P01909 AL023803.3-201ENST00000615559 522 ntBASIC12.39□□□□□ -0.43
HLA-DQA1P01909 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DQA1P01909 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
HLA-DQA1P01909 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.39□□□□□ -0.43
HLA-DQA1P01909 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DQA1P01909 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DQA1P01909 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DQA1P01909 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DQA1P01909 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DQA1P01909 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC12.39□□□□□ -0.43
HLA-DQA1P01909 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC12.39□□□□□ -0.43
HLA-DQA1P01909 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DQA1P01909 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DQA1P01909 MECR-202ENST00000373791 2416 ntTSL 2 BASIC12.39□□□□□ -0.43
HLA-DQA1P01909 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DQA1P01909 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC12.39□□□□□ -0.43
HLA-DQA1P01909 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DQA1P01909 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DQA1P01909 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DQA1P01909 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DQA1P01909 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
HLA-DQA1P01909 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DQA1P01909 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.38□□□□□ -0.43
HLA-DQA1P01909 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DQA1P01909 AC097374.2-201ENST00000618617 1306 ntBASIC12.38□□□□□ -0.43
HLA-DQA1P01909 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC12.38□□□□□ -0.43
HLA-DQA1P01909 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DQA1P01909 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC12.38□□□□□ -0.43
HLA-DQA1P01909 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DQA1P01909 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC12.38□□□□□ -0.43
HLA-DQA1P01909 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
HLA-DQA1P01909 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DQA1P01909 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DQA1P01909 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
HLA-DQA1P01909 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC12.38□□□□□ -0.43
HLA-DQA1P01909 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DQA1P01909 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DQA1P01909 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC12.38□□□□□ -0.43
HLA-DQA1P01909 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DQA1P01909 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
HLA-DQA1P01909 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC12.38□□□□□ -0.43
HLA-DQA1P01909 POR-201ENST00000394893 2532 ntTSL 5 BASIC12.38□□□□□ -0.43
HLA-DQA1P01909 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DQA1P01909 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC12.38□□□□□ -0.43
HLA-DQA1P01909 CICP23-201ENST00000605013 2741 ntBASIC12.38□□□□□ -0.43
HLA-DQA1P01909 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DQA1P01909 INGX-201ENST00000359239 846 ntBASIC12.38□□□□□ -0.43
HLA-DQA1P01909 MIR648-201ENST00000385046 94 ntBASIC12.38□□□□□ -0.43
HLA-DQA1P01909 HMGA1P5-201ENST00000412453 271 ntBASIC12.38□□□□□ -0.43
HLA-DQA1P01909 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DQA1P01909 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC12.38□□□□□ -0.43
HLA-DQA1P01909 POU5F1P6-201ENST00000466990 990 ntBASIC12.38□□□□□ -0.43
HLA-DQA1P01909 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC12.38□□□□□ -0.43
HLA-DQA1P01909 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DQA1P01909 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC12.38□□□□□ -0.43
HLA-DQA1P01909 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
HLA-DQA1P01909 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DQA1P01909 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
HLA-DQA1P01909 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC12.38□□□□□ -0.43
HLA-DQA1P01909 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DQA1P01909 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
HLA-DQA1P01909 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DQA1P01909 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
HLA-DQA1P01909 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DQA1P01909 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC12.38□□□□□ -0.43
HLA-DQA1P01909 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DQA1P01909 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DQA1P01909 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DQA1P01909 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DQA1P01909 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC12.38□□□□□ -0.43
HLA-DQA1P01909 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
HLA-DQA1P01909 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DQA1P01909 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DQA1P01909 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DQA1P01909 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DQA1P01909 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DQA1P01909 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
HLA-DQA1P01909 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DQA1P01909 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC12.38□□□□□ -0.43
HLA-DQA1P01909 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms