Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 AC005593.1-201ENST00000624894 515 ntBASIC17.04■□□□□ 0.32
IFNB1P01574 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
IFNB1P01574 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
IFNB1P01574 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
IFNB1P01574 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
IFNB1P01574 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
IFNB1P01574 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
IFNB1P01574 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.04■□□□□ 0.32
IFNB1P01574 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.04■□□□□ 0.32
IFNB1P01574 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
IFNB1P01574 PRAL-201ENST00000624952 3286 ntBASIC17.04■□□□□ 0.32
IFNB1P01574 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.04■□□□□ 0.32
IFNB1P01574 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.04■□□□□ 0.32
IFNB1P01574 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
IFNB1P01574 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
IFNB1P01574 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
IFNB1P01574 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
IFNB1P01574 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IFNB1P01574 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
IFNB1P01574 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
IFNB1P01574 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
IFNB1P01574 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
IFNB1P01574 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
IFNB1P01574 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.03■□□□□ 0.32
IFNB1P01574 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.03■□□□□ 0.32
IFNB1P01574 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IFNB1P01574 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IFNB1P01574 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.03■□□□□ 0.32
IFNB1P01574 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.03■□□□□ 0.32
IFNB1P01574 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.03■□□□□ 0.32
IFNB1P01574 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.03■□□□□ 0.32
IFNB1P01574 AC012640.2-201ENST00000561606 901 ntBASIC17.03■□□□□ 0.32
IFNB1P01574 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC17.03■□□□□ 0.32
IFNB1P01574 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.03■□□□□ 0.32
IFNB1P01574 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.03■□□□□ 0.32
IFNB1P01574 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
IFNB1P01574 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IFNB1P01574 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
IFNB1P01574 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IFNB1P01574 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
IFNB1P01574 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.03■□□□□ 0.32
IFNB1P01574 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IFNB1P01574 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.03■□□□□ 0.32
IFNB1P01574 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IFNB1P01574 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IFNB1P01574 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
IFNB1P01574 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
IFNB1P01574 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
IFNB1P01574 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.02■□□□□ 0.32
IFNB1P01574 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
IFNB1P01574 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.02■□□□□ 0.32
IFNB1P01574 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
IFNB1P01574 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
IFNB1P01574 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
IFNB1P01574 AC012569.1-201ENST00000591191 1524 ntBASIC17.02■□□□□ 0.32
IFNB1P01574 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
IFNB1P01574 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
IFNB1P01574 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
IFNB1P01574 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
IFNB1P01574 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
IFNB1P01574 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
IFNB1P01574 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
IFNB1P01574 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
IFNB1P01574 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.02■□□□□ 0.32
IFNB1P01574 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
IFNB1P01574 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
IFNB1P01574 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.02■□□□□ 0.32
IFNB1P01574 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
IFNB1P01574 MRPL20P1-201ENST00000400819 433 ntBASIC17.02■□□□□ 0.32
IFNB1P01574 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.02■□□□□ 0.32
IFNB1P01574 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
IFNB1P01574 AF186996.4-201ENST00000467186 377 ntBASIC17.02■□□□□ 0.32
IFNB1P01574 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.02■□□□□ 0.32
IFNB1P01574 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.02■□□□□ 0.32
IFNB1P01574 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.02■□□□□ 0.32
IFNB1P01574 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.02■□□□□ 0.32
IFNB1P01574 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.02■□□□□ 0.32
IFNB1P01574 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC17.02■□□□□ 0.32
IFNB1P01574 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
IFNB1P01574 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
IFNB1P01574 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
IFNB1P01574 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
IFNB1P01574 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
IFNB1P01574 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.02■□□□□ 0.31
IFNB1P01574 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
IFNB1P01574 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
IFNB1P01574 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
IFNB1P01574 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.02■□□□□ 0.31
IFNB1P01574 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
IFNB1P01574 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
IFNB1P01574 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
IFNB1P01574 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.01■□□□□ 0.31
IFNB1P01574 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
IFNB1P01574 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.01■□□□□ 0.31
IFNB1P01574 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
IFNB1P01574 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
IFNB1P01574 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
IFNB1P01574 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
IFNB1P01574 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.01■□□□□ 0.31
IFNB1P01574 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms