Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
VAPBO95292 AL365203.3-201ENST00000609742 2057 ntBASIC16.52■□□□□ 0.23
VAPBO95292 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
VAPBO95292 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
VAPBO95292 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
VAPBO95292 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VAPBO95292 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VAPBO95292 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VAPBO95292 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.51■□□□□ 0.23
VAPBO95292 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.51■□□□□ 0.23
VAPBO95292 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.51■□□□□ 0.23
VAPBO95292 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VAPBO95292 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VAPBO95292 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VAPBO95292 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VAPBO95292 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VAPBO95292 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VAPBO95292 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VAPBO95292 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VAPBO95292 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
VAPBO95292 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
VAPBO95292 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.51■□□□□ 0.23
VAPBO95292 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.51■□□□□ 0.23
VAPBO95292 RPL13AP23-201ENST00000480739 586 ntBASIC16.51■□□□□ 0.23
VAPBO95292 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.51■□□□□ 0.23
VAPBO95292 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VAPBO95292 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VAPBO95292 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.51■□□□□ 0.23
VAPBO95292 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.51■□□□□ 0.23
VAPBO95292 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.51■□□□□ 0.23
VAPBO95292 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VAPBO95292 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VAPBO95292 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.51■□□□□ 0.23
VAPBO95292 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.51■□□□□ 0.23
VAPBO95292 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VAPBO95292 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VAPBO95292 AC103702.1-201ENST00000548801 2630 ntBASIC16.51■□□□□ 0.23
VAPBO95292 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VAPBO95292 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VAPBO95292 AC010491.1-201ENST00000563101 2797 ntBASIC16.51■□□□□ 0.23
VAPBO95292 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VAPBO95292 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VAPBO95292 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
VAPBO95292 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
VAPBO95292 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
VAPBO95292 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
VAPBO95292 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VAPBO95292 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VAPBO95292 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
VAPBO95292 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VAPBO95292 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VAPBO95292 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.51■□□□□ 0.23
VAPBO95292 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
VAPBO95292 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VAPBO95292 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VAPBO95292 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
VAPBO95292 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.51■□□□□ 0.23
VAPBO95292 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
VAPBO95292 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.5■□□□□ 0.23
VAPBO95292 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
VAPBO95292 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.5■□□□□ 0.23
VAPBO95292 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VAPBO95292 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VAPBO95292 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
VAPBO95292 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VAPBO95292 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
VAPBO95292 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.5■□□□□ 0.23
VAPBO95292 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VAPBO95292 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
VAPBO95292 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
VAPBO95292 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
VAPBO95292 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.5■□□□□ 0.23
VAPBO95292 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.5■□□□□ 0.23
VAPBO95292 AC007967.2-201ENST00000432613 625 ntBASIC16.5■□□□□ 0.23
VAPBO95292 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.5■□□□□ 0.23
VAPBO95292 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
VAPBO95292 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.5■□□□□ 0.23
VAPBO95292 AL603832.2-201ENST00000566195 2125 ntBASIC16.5■□□□□ 0.23
VAPBO95292 AC018845.2-201ENST00000568326 409 ntBASIC16.5■□□□□ 0.23
VAPBO95292 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
VAPBO95292 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
VAPBO95292 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.5■□□□□ 0.23
VAPBO95292 AL121894.2-201ENST00000602977 491 ntBASIC16.5■□□□□ 0.23
VAPBO95292 AC064836.3-201ENST00000607928 673 ntBASIC16.5■□□□□ 0.23
VAPBO95292 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.5■□□□□ 0.23
VAPBO95292 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
VAPBO95292 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VAPBO95292 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
VAPBO95292 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.5■□□□□ 0.23
VAPBO95292 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.5■□□□□ 0.23
VAPBO95292 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
VAPBO95292 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.5■□□□□ 0.23
VAPBO95292 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VAPBO95292 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.5■□□□□ 0.23
VAPBO95292 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.5■□□□□ 0.23
VAPBO95292 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VAPBO95292 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VAPBO95292 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.5■□□□□ 0.23
VAPBO95292 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VAPBO95292 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms