Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RFPL1O75677 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RFPL1O75677 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RFPL1O75677 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RFPL1O75677 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RFPL1O75677 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RFPL1O75677 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
RFPL1O75677 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RFPL1O75677 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.48■□□□□ 0.23
RFPL1O75677 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFPL1O75677 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
RFPL1O75677 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RFPL1O75677 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFPL1O75677 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RFPL1O75677 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RFPL1O75677 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.48■□□□□ 0.23
RFPL1O75677 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFPL1O75677 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFPL1O75677 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFPL1O75677 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFPL1O75677 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RFPL1O75677 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFPL1O75677 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFPL1O75677 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.48■□□□□ 0.23
RFPL1O75677 ELK2BP-201ENST00000415014 1224 ntBASIC16.48■□□□□ 0.23
RFPL1O75677 AC004832.2-201ENST00000426397 482 ntBASIC16.48■□□□□ 0.23
RFPL1O75677 AC007967.2-201ENST00000432613 625 ntBASIC16.48■□□□□ 0.23
RFPL1O75677 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.48■□□□□ 0.23
RFPL1O75677 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RFPL1O75677 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RFPL1O75677 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.48■□□□□ 0.23
RFPL1O75677 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.48■□□□□ 0.23
RFPL1O75677 AC087641.1-201ENST00000557561 1021 ntBASIC16.48■□□□□ 0.23
RFPL1O75677 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RFPL1O75677 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.48■□□□□ 0.23
RFPL1O75677 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.48■□□□□ 0.23
RFPL1O75677 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RFPL1O75677 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
RFPL1O75677 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.48■□□□□ 0.23
RFPL1O75677 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RFPL1O75677 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RFPL1O75677 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.48■□□□□ 0.23
RFPL1O75677 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFPL1O75677 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RFPL1O75677 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
RFPL1O75677 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFPL1O75677 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFPL1O75677 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RFPL1O75677 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFPL1O75677 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.47■□□□□ 0.23
RFPL1O75677 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
RFPL1O75677 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RFPL1O75677 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.47■□□□□ 0.23
RFPL1O75677 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
RFPL1O75677 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFPL1O75677 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
RFPL1O75677 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
RFPL1O75677 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFPL1O75677 AC073347.1-201ENST00000421633 2643 ntBASIC16.47■□□□□ 0.23
RFPL1O75677 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFPL1O75677 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.47■□□□□ 0.23
RFPL1O75677 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.47■□□□□ 0.23
RFPL1O75677 AC112482.1-201ENST00000492080 688 ntBASIC16.47■□□□□ 0.23
RFPL1O75677 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.47■□□□□ 0.23
RFPL1O75677 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.47■□□□□ 0.23
RFPL1O75677 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.47■□□□□ 0.23
RFPL1O75677 AC006557.2-201ENST00000592985 1240 ntBASIC16.47■□□□□ 0.23
RFPL1O75677 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFPL1O75677 PGM5P2-202ENST00000637225 1043 ntBASIC16.47■□□□□ 0.23
RFPL1O75677 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFPL1O75677 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
RFPL1O75677 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
RFPL1O75677 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFPL1O75677 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFPL1O75677 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.47■□□□□ 0.23
RFPL1O75677 AC013268.4-201ENST00000637413 2228 ntBASIC16.47■□□□□ 0.23
RFPL1O75677 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFPL1O75677 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
RFPL1O75677 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.47■□□□□ 0.23
RFPL1O75677 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.47■□□□□ 0.23
RFPL1O75677 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RFPL1O75677 AC022532.1-201ENST00000624563 1728 ntBASIC16.47■□□□□ 0.23
RFPL1O75677 DBET-201ENST00000630918 3363 ntBASIC16.47■□□□□ 0.23
RFPL1O75677 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
RFPL1O75677 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFPL1O75677 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RFPL1O75677 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.47■□□□□ 0.23
RFPL1O75677 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFPL1O75677 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RFPL1O75677 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFPL1O75677 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFPL1O75677 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.46■□□□□ 0.23
RFPL1O75677 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
RFPL1O75677 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFPL1O75677 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFPL1O75677 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFPL1O75677 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFPL1O75677 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.46■□□□□ 0.23
RFPL1O75677 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.46■□□□□ 0.23
RFPL1O75677 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms