Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.42■□□□□ 0.06
PRAMEF2O60811 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PRAMEF2O60811 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PRAMEF2O60811 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PRAMEF2O60811 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
PRAMEF2O60811 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.42■□□□□ 0.06
PRAMEF2O60811 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.42■□□□□ 0.06
PRAMEF2O60811 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PRAMEF2O60811 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.42■□□□□ 0.06
PRAMEF2O60811 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PRAMEF2O60811 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PRAMEF2O60811 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.42■□□□□ 0.06
PRAMEF2O60811 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.42■□□□□ 0.06
PRAMEF2O60811 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.42■□□□□ 0.06
PRAMEF2O60811 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.42■□□□□ 0.06
PRAMEF2O60811 FAM86GP-201ENST00000448322 971 ntBASIC15.42■□□□□ 0.06
PRAMEF2O60811 KRT18P34-201ENST00000488218 1270 ntBASIC15.42■□□□□ 0.06
PRAMEF2O60811 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PRAMEF2O60811 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
PRAMEF2O60811 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PRAMEF2O60811 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PRAMEF2O60811 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.42■□□□□ 0.06
PRAMEF2O60811 AC093520.2-201ENST00000561830 333 ntBASIC15.42■□□□□ 0.06
PRAMEF2O60811 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.42■□□□□ 0.06
PRAMEF2O60811 AC093512.1-201ENST00000617969 520 ntBASIC15.42■□□□□ 0.06
PRAMEF2O60811 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
PRAMEF2O60811 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
PRAMEF2O60811 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PRAMEF2O60811 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PRAMEF2O60811 ME2P1-201ENST00000426028 1970 ntBASIC15.42■□□□□ 0.06
PRAMEF2O60811 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PRAMEF2O60811 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PRAMEF2O60811 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PRAMEF2O60811 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PRAMEF2O60811 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRAMEF2O60811 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PRAMEF2O60811 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.41■□□□□ 0.06
PRAMEF2O60811 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.41■□□□□ 0.06
PRAMEF2O60811 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
PRAMEF2O60811 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRAMEF2O60811 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
PRAMEF2O60811 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRAMEF2O60811 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
PRAMEF2O60811 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRAMEF2O60811 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRAMEF2O60811 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.41■□□□□ 0.06
PRAMEF2O60811 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRAMEF2O60811 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRAMEF2O60811 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PRAMEF2O60811 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PRAMEF2O60811 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PRAMEF2O60811 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.41■□□□□ 0.06
PRAMEF2O60811 KRT18P32-201ENST00000424695 1287 ntBASIC15.41■□□□□ 0.06
PRAMEF2O60811 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.41■□□□□ 0.06
PRAMEF2O60811 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PRAMEF2O60811 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.41■□□□□ 0.06
PRAMEF2O60811 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.41■□□□□ 0.06
PRAMEF2O60811 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.41■□□□□ 0.06
PRAMEF2O60811 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.41■□□□□ 0.06
PRAMEF2O60811 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.41■□□□□ 0.06
PRAMEF2O60811 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRAMEF2O60811 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
PRAMEF2O60811 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.41■□□□□ 0.06
PRAMEF2O60811 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.41■□□□□ 0.06
PRAMEF2O60811 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
PRAMEF2O60811 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.41■□□□□ 0.06
PRAMEF2O60811 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRAMEF2O60811 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRAMEF2O60811 WASH6P-202ENST00000359512 1437 ntBASIC15.41■□□□□ 0.06
PRAMEF2O60811 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRAMEF2O60811 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.41■□□□□ 0.06
PRAMEF2O60811 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.41■□□□□ 0.06
PRAMEF2O60811 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRAMEF2O60811 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRAMEF2O60811 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PRAMEF2O60811 MST1L-201ENST00000442552 2185 ntBASIC15.41■□□□□ 0.06
PRAMEF2O60811 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRAMEF2O60811 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEF2O60811 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.4■□□□□ 0.06
PRAMEF2O60811 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PRAMEF2O60811 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEF2O60811 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEF2O60811 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
PRAMEF2O60811 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.4■□□□□ 0.06
PRAMEF2O60811 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PRAMEF2O60811 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
PRAMEF2O60811 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEF2O60811 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEF2O60811 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.4■□□□□ 0.06
PRAMEF2O60811 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEF2O60811 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEF2O60811 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.4■□□□□ 0.06
PRAMEF2O60811 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEF2O60811 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
PRAMEF2O60811 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEF2O60811 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEF2O60811 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEF2O60811 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PRAMEF2O60811 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEF2O60811 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms