Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 RPS8P6-201ENST00000426177 609 ntBASIC15.39■□□□□ 0.05
HCN1O60741 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.39■□□□□ 0.05
HCN1O60741 AL513480.1-201ENST00000451731 511 ntBASIC15.39■□□□□ 0.05
HCN1O60741 ALG1L5P-201ENST00000482043 771 ntBASIC15.39■□□□□ 0.05
HCN1O60741 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.39■□□□□ 0.05
HCN1O60741 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.39■□□□□ 0.05
HCN1O60741 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.39■□□□□ 0.05
HCN1O60741 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.39■□□□□ 0.05
HCN1O60741 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.39■□□□□ 0.05
HCN1O60741 MIR4469-201ENST00000583919 79 ntBASIC15.39■□□□□ 0.05
HCN1O60741 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.39■□□□□ 0.05
HCN1O60741 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.39■□□□□ 0.05
HCN1O60741 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.39■□□□□ 0.05
HCN1O60741 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.39■□□□□ 0.05
HCN1O60741 ACTL9-202ENST00000612068 1252 ntBASIC15.39■□□□□ 0.05
HCN1O60741 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
HCN1O60741 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HCN1O60741 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
HCN1O60741 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
HCN1O60741 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.39■□□□□ 0.05
HCN1O60741 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HCN1O60741 ELL2P1-201ENST00000413990 1906 ntBASIC15.39■□□□□ 0.05
HCN1O60741 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HCN1O60741 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
HCN1O60741 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HCN1O60741 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
HCN1O60741 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.39■□□□□ 0.05
HCN1O60741 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
HCN1O60741 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HCN1O60741 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HCN1O60741 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HCN1O60741 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.38■□□□□ 0.05
HCN1O60741 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
HCN1O60741 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HCN1O60741 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.38■□□□□ 0.05
HCN1O60741 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HCN1O60741 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.38■□□□□ 0.05
HCN1O60741 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HCN1O60741 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HCN1O60741 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HCN1O60741 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HCN1O60741 AC254562.1-201ENST00000417586 456 ntBASIC15.38■□□□□ 0.05
HCN1O60741 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.38■□□□□ 0.05
HCN1O60741 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.38■□□□□ 0.05
HCN1O60741 DUX4L17-201ENST00000557360 1267 ntBASIC15.38■□□□□ 0.05
HCN1O60741 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.38■□□□□ 0.05
HCN1O60741 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.38■□□□□ 0.05
HCN1O60741 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HCN1O60741 LINC00895-201ENST00000629028 1637 ntBASIC15.38■□□□□ 0.05
HCN1O60741 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
HCN1O60741 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.38■□□□□ 0.05
HCN1O60741 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.38■□□□□ 0.05
HCN1O60741 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.38■□□□□ 0.05
HCN1O60741 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HCN1O60741 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.38■□□□□ 0.05
HCN1O60741 AC005052.1-201ENST00000625181 2492 ntBASIC15.38■□□□□ 0.05
HCN1O60741 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HCN1O60741 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
HCN1O60741 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HCN1O60741 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
HCN1O60741 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HCN1O60741 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
HCN1O60741 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
HCN1O60741 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HCN1O60741 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HCN1O60741 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HCN1O60741 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.37■□□□□ 0.05
HCN1O60741 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
HCN1O60741 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HCN1O60741 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HCN1O60741 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HCN1O60741 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HCN1O60741 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.37■□□□□ 0.05
HCN1O60741 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HCN1O60741 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
HCN1O60741 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
HCN1O60741 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.37■□□□□ 0.05
HCN1O60741 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HCN1O60741 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.37■□□□□ 0.05
HCN1O60741 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.37■□□□□ 0.05
HCN1O60741 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.37■□□□□ 0.05
HCN1O60741 DNAJB3-202ENST00000449667 1266 ntBASIC15.37■□□□□ 0.05
HCN1O60741 HLA-J-202ENST00000469281 1241 ntBASIC15.37■□□□□ 0.05
HCN1O60741 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.37■□□□□ 0.05
HCN1O60741 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
HCN1O60741 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.37■□□□□ 0.05
HCN1O60741 AC068137.2-201ENST00000605408 478 ntBASIC15.37■□□□□ 0.05
HCN1O60741 AL078644.1-201ENST00000609881 752 ntBASIC15.37■□□□□ 0.05
HCN1O60741 AL645728.2-201ENST00000641974 660 ntBASIC15.37■□□□□ 0.05
HCN1O60741 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.37■□□□□ 0.05
HCN1O60741 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HCN1O60741 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.37■□□□□ 0.05
HCN1O60741 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
HCN1O60741 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
HCN1O60741 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HCN1O60741 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
HCN1O60741 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.37■□□□□ 0.05
HCN1O60741 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
HCN1O60741 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
HCN1O60741 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms