Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
DUX1O43812 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.65■□□□□ 0.1
DUX1O43812 ZNF890P-202ENST00000530367 1156 ntBASIC15.65■□□□□ 0.1
DUX1O43812 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.65■□□□□ 0.1
DUX1O43812 AC008738.7-201ENST00000609744 511 ntBASIC15.65■□□□□ 0.1
DUX1O43812 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
DUX1O43812 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.65■□□□□ 0.1
DUX1O43812 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
DUX1O43812 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
DUX1O43812 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
DUX1O43812 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
DUX1O43812 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
DUX1O43812 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
DUX1O43812 HLA-A-202ENST00000376806 1854 ntBASIC15.65■□□□□ 0.1
DUX1O43812 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
DUX1O43812 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
DUX1O43812 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
DUX1O43812 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
DUX1O43812 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
DUX1O43812 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.1
DUX1O43812 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
DUX1O43812 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
DUX1O43812 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
DUX1O43812 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
DUX1O43812 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.64■□□□□ 0.09
DUX1O43812 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
DUX1O43812 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.64■□□□□ 0.09
DUX1O43812 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
DUX1O43812 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
DUX1O43812 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.64■□□□□ 0.09
DUX1O43812 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
DUX1O43812 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
DUX1O43812 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
DUX1O43812 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
DUX1O43812 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
DUX1O43812 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
DUX1O43812 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.64■□□□□ 0.09
DUX1O43812 AC009407.1-201ENST00000568958 598 ntBASIC15.64■□□□□ 0.09
DUX1O43812 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.64■□□□□ 0.09
DUX1O43812 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
DUX1O43812 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
DUX1O43812 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.64■□□□□ 0.09
DUX1O43812 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
DUX1O43812 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.64■□□□□ 0.09
DUX1O43812 AC005332.8-201ENST00000622750 2735 ntBASIC15.64■□□□□ 0.09
DUX1O43812 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.64■□□□□ 0.09
DUX1O43812 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
DUX1O43812 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
DUX1O43812 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
DUX1O43812 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
DUX1O43812 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
DUX1O43812 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
DUX1O43812 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
DUX1O43812 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.63■□□□□ 0.09
DUX1O43812 KRT8P12-202ENST00000472924 1397 ntBASIC15.63■□□□□ 0.09
DUX1O43812 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
DUX1O43812 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
DUX1O43812 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
DUX1O43812 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
DUX1O43812 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
DUX1O43812 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
DUX1O43812 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
DUX1O43812 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
DUX1O43812 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.63■□□□□ 0.09
DUX1O43812 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
DUX1O43812 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
DUX1O43812 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.63■□□□□ 0.09
DUX1O43812 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
DUX1O43812 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC15.63■□□□□ 0.09
DUX1O43812 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.63■□□□□ 0.09
DUX1O43812 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.63■□□□□ 0.09
DUX1O43812 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.63■□□□□ 0.09
DUX1O43812 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
DUX1O43812 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
DUX1O43812 AC135586.1-201ENST00000539323 574 ntBASIC15.63■□□□□ 0.09
DUX1O43812 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.63■□□□□ 0.09
DUX1O43812 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.63■□□□□ 0.09
DUX1O43812 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.63■□□□□ 0.09
DUX1O43812 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
DUX1O43812 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
DUX1O43812 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.63■□□□□ 0.09
DUX1O43812 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
DUX1O43812 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
DUX1O43812 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
DUX1O43812 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
DUX1O43812 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
DUX1O43812 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.63■□□□□ 0.09
DUX1O43812 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
DUX1O43812 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.63■□□□□ 0.09
DUX1O43812 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
DUX1O43812 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
DUX1O43812 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
DUX1O43812 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.63■□□□□ 0.09
DUX1O43812 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
DUX1O43812 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
DUX1O43812 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
DUX1O43812 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
DUX1O43812 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
DUX1O43812 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
DUX1O43812 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms