Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
APAF1O14727 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC21.55■■□□□ 1.04
APAF1O14727 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC21.55■■□□□ 1.04
APAF1O14727 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
APAF1O14727 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
APAF1O14727 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
APAF1O14727 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
APAF1O14727 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
APAF1O14727 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC21.54■■□□□ 1.04
APAF1O14727 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
APAF1O14727 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
APAF1O14727 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC21.54■■□□□ 1.04
APAF1O14727 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
APAF1O14727 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC21.54■■□□□ 1.04
APAF1O14727 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC21.54■■□□□ 1.04
APAF1O14727 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
APAF1O14727 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC21.54■■□□□ 1.04
APAF1O14727 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
APAF1O14727 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
APAF1O14727 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
APAF1O14727 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
APAF1O14727 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC21.54■■□□□ 1.04
APAF1O14727 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
APAF1O14727 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
APAF1O14727 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC21.54■■□□□ 1.04
APAF1O14727 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC21.54■■□□□ 1.04
APAF1O14727 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
APAF1O14727 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC21.54■■□□□ 1.04
APAF1O14727 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC21.54■■□□□ 1.04
APAF1O14727 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
APAF1O14727 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC21.54■■□□□ 1.04
APAF1O14727 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
APAF1O14727 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
APAF1O14727 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC21.53■■□□□ 1.04
APAF1O14727 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
APAF1O14727 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC21.53■■□□□ 1.04
APAF1O14727 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
APAF1O14727 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC21.53■■□□□ 1.04
APAF1O14727 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
APAF1O14727 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
APAF1O14727 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
APAF1O14727 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
APAF1O14727 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
APAF1O14727 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
APAF1O14727 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
APAF1O14727 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC21.53■■□□□ 1.04
APAF1O14727 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
APAF1O14727 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
APAF1O14727 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
APAF1O14727 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
APAF1O14727 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
APAF1O14727 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
APAF1O14727 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
APAF1O14727 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
APAF1O14727 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
APAF1O14727 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
APAF1O14727 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC21.52■■□□□ 1.04
APAF1O14727 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC21.52■■□□□ 1.04
APAF1O14727 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
APAF1O14727 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
APAF1O14727 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
APAF1O14727 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
APAF1O14727 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC21.52■■□□□ 1.04
APAF1O14727 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC21.52■■□□□ 1.04
APAF1O14727 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
APAF1O14727 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
APAF1O14727 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
APAF1O14727 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
APAF1O14727 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
APAF1O14727 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC21.52■■□□□ 1.04
APAF1O14727 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
APAF1O14727 AP3S2-216ENST00000617003 1561 ntBASIC21.52■■□□□ 1.04
APAF1O14727 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
APAF1O14727 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.03
APAF1O14727 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
APAF1O14727 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC21.52■■□□□ 1.03
APAF1O14727 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC21.52■■□□□ 1.03
APAF1O14727 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
APAF1O14727 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
APAF1O14727 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC21.51■■□□□ 1.03
APAF1O14727 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
APAF1O14727 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
APAF1O14727 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
APAF1O14727 GOLGA6L17P-202ENST00000614358 1398 ntBASIC21.51■■□□□ 1.03
APAF1O14727 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC21.51■■□□□ 1.03
APAF1O14727 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
APAF1O14727 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
APAF1O14727 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC21.51■■□□□ 1.03
APAF1O14727 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
APAF1O14727 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
APAF1O14727 PP14571-201ENST00000404327 934 ntTSL 2 BASIC21.51■■□□□ 1.03
APAF1O14727 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC21.51■■□□□ 1.03
APAF1O14727 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC21.51■■□□□ 1.03
APAF1O14727 TSFM-210ENST00000550559 897 ntTSL 5 BASIC21.51■■□□□ 1.03
APAF1O14727 AC061975.2-201ENST00000581722 295 ntBASIC21.51■■□□□ 1.03
APAF1O14727 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC21.51■■□□□ 1.03
APAF1O14727 AC006538.3-201ENST00000612495 578 ntBASIC21.51■■□□□ 1.03
APAF1O14727 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
APAF1O14727 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC21.51■■□□□ 1.03
APAF1O14727 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms