Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 BASP1P1-201ENST00000430708 665 ntBASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 AC055876.3-201ENST00000431496 288 ntBASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 HLA-J-202ENST00000469281 1241 ntBASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 IGHV3-42-201ENST00000520410 361 ntBASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 AC138649.4-201ENST00000612222 287 ntBASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 AC084121.4-201ENST00000641598 221 ntBASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 AF228730.8-201ENST00000642140 221 ntBASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 MIR346-201ENST00000362234 95 ntBASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 MIR4745-201ENST00000577608 62 ntBASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms