Protein–RNA interactions for Protein: A0AVI4

TMEM129, E3 ubiquitin-protein ligase TM129, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM129A0AVI4 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.89□□□□□ -0.03
TMEM129A0AVI4 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
TMEM129A0AVI4 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM129A0AVI4 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.89□□□□□ -0.03
TMEM129A0AVI4 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TMEM129A0AVI4 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
TMEM129A0AVI4 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM129A0AVI4 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM129A0AVI4 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM129A0AVI4 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM129A0AVI4 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM129A0AVI4 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.89□□□□□ -0.03
TMEM129A0AVI4 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.89□□□□□ -0.03
TMEM129A0AVI4 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.89□□□□□ -0.03
TMEM129A0AVI4 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.89□□□□□ -0.03
TMEM129A0AVI4 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.89□□□□□ -0.03
TMEM129A0AVI4 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM129A0AVI4 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.89□□□□□ -0.03
TMEM129A0AVI4 AC145285.3-201ENST00000564603 959 ntBASIC14.89□□□□□ -0.03
TMEM129A0AVI4 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.89□□□□□ -0.03
TMEM129A0AVI4 TERC-201ENST00000602385 541 ntBASIC14.89□□□□□ -0.03
TMEM129A0AVI4 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TMEM129A0AVI4 AC004706.3-202ENST00000621574 984 ntBASIC14.89□□□□□ -0.03
TMEM129A0AVI4 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM129A0AVI4 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM129A0AVI4 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM129A0AVI4 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.89□□□□□ -0.03
TMEM129A0AVI4 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM129A0AVI4 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.89□□□□□ -0.03
TMEM129A0AVI4 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM129A0AVI4 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.89□□□□□ -0.03
TMEM129A0AVI4 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM129A0AVI4 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM129A0AVI4 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TMEM129A0AVI4 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.89□□□□□ -0.03
TMEM129A0AVI4 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM129A0AVI4 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM129A0AVI4 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM129A0AVI4 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
TMEM129A0AVI4 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM129A0AVI4 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM129A0AVI4 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM129A0AVI4 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM129A0AVI4 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM129A0AVI4 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.88□□□□□ -0.03
TMEM129A0AVI4 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.88□□□□□ -0.03
TMEM129A0AVI4 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.88□□□□□ -0.03
TMEM129A0AVI4 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TMEM129A0AVI4 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
TMEM129A0AVI4 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM129A0AVI4 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.88□□□□□ -0.03
TMEM129A0AVI4 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM129A0AVI4 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM129A0AVI4 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM129A0AVI4 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM129A0AVI4 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM129A0AVI4 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.88□□□□□ -0.03
TMEM129A0AVI4 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TMEM129A0AVI4 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.88□□□□□ -0.03
TMEM129A0AVI4 RNA5SP415-201ENST00000517246 115 ntBASIC14.88□□□□□ -0.03
TMEM129A0AVI4 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.88□□□□□ -0.03
TMEM129A0AVI4 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.88□□□□□ -0.03
TMEM129A0AVI4 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.88□□□□□ -0.03
TMEM129A0AVI4 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.88□□□□□ -0.03
TMEM129A0AVI4 AC006557.2-201ENST00000592985 1240 ntBASIC14.88□□□□□ -0.03
TMEM129A0AVI4 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM129A0AVI4 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TMEM129A0AVI4 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
TMEM129A0AVI4 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM129A0AVI4 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM129A0AVI4 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM129A0AVI4 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM129A0AVI4 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM129A0AVI4 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM129A0AVI4 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
TMEM129A0AVI4 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM129A0AVI4 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM129A0AVI4 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM129A0AVI4 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM129A0AVI4 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
TMEM129A0AVI4 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TMEM129A0AVI4 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
TMEM129A0AVI4 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.87□□□□□ -0.03
TMEM129A0AVI4 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM129A0AVI4 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM129A0AVI4 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM129A0AVI4 TOP3BP1-201ENST00000420768 1380 ntBASIC14.87□□□□□ -0.03
TMEM129A0AVI4 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.87□□□□□ -0.03
TMEM129A0AVI4 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
TMEM129A0AVI4 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM129A0AVI4 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM129A0AVI4 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
TMEM129A0AVI4 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM129A0AVI4 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.87□□□□□ -0.03
TMEM129A0AVI4 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
TMEM129A0AVI4 KRT8P39-201ENST00000396270 1433 ntBASIC14.87□□□□□ -0.03
TMEM129A0AVI4 NCF1C-201ENST00000438382 1427 ntBASIC14.87□□□□□ -0.03
TMEM129A0AVI4 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM129A0AVI4 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM129A0AVI4 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms