Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TCRBV4S1A1TA0A5B7 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TCRBV4S1A1TA0A5B7 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TCRBV4S1A1TA0A5B7 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TCRBV4S1A1TA0A5B7 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TCRBV4S1A1TA0A5B7 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TCRBV4S1A1TA0A5B7 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
TCRBV4S1A1TA0A5B7 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC13.23□□□□□ -0.29
TCRBV4S1A1TA0A5B7 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
TCRBV4S1A1TA0A5B7 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TCRBV4S1A1TA0A5B7 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TCRBV4S1A1TA0A5B7 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TCRBV4S1A1TA0A5B7 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TCRBV4S1A1TA0A5B7 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.23□□□□□ -0.29
TCRBV4S1A1TA0A5B7 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
TCRBV4S1A1TA0A5B7 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TCRBV4S1A1TA0A5B7 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.23□□□□□ -0.29
TCRBV4S1A1TA0A5B7 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC13.23□□□□□ -0.29
TCRBV4S1A1TA0A5B7 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.23□□□□□ -0.29
TCRBV4S1A1TA0A5B7 ACTL9-202ENST00000612068 1252 ntBASIC13.23□□□□□ -0.29
TCRBV4S1A1TA0A5B7 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
TCRBV4S1A1TA0A5B7 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.23□□□□□ -0.29
TCRBV4S1A1TA0A5B7 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TCRBV4S1A1TA0A5B7 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
TCRBV4S1A1TA0A5B7 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TCRBV4S1A1TA0A5B7 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC13.23□□□□□ -0.29
TCRBV4S1A1TA0A5B7 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC13.23□□□□□ -0.29
TCRBV4S1A1TA0A5B7 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TCRBV4S1A1TA0A5B7 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TCRBV4S1A1TA0A5B7 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
TCRBV4S1A1TA0A5B7 GCK-202ENST00000345378 2421 ntTSL 2 BASIC13.23□□□□□ -0.29
TCRBV4S1A1TA0A5B7 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TCRBV4S1A1TA0A5B7 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.23□□□□□ -0.29
TCRBV4S1A1TA0A5B7 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
TCRBV4S1A1TA0A5B7 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TCRBV4S1A1TA0A5B7 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TCRBV4S1A1TA0A5B7 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TCRBV4S1A1TA0A5B7 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
TCRBV4S1A1TA0A5B7 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
TCRBV4S1A1TA0A5B7 CYP51A1P2-201ENST00000419457 1499 ntBASIC13.23□□□□□ -0.29
TCRBV4S1A1TA0A5B7 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC13.23□□□□□ -0.29
TCRBV4S1A1TA0A5B7 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TCRBV4S1A1TA0A5B7 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 KRT8P49-201ENST00000604166 1432 ntBASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 PC-204ENST00000524491 1714 ntTSL 2 BASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 HNRNPRP1-201ENST00000453465 1695 ntBASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 AC007950.2-201ENST00000615045 2347 ntBASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 AC002056.1-201ENST00000395613 760 ntBASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 AC027796.2-201ENST00000575326 344 ntBASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 AL645728.2-201ENST00000641974 660 ntBASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 AL139011.1-202ENST00000642063 584 ntBASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 MST1L-201ENST00000442552 2185 ntBASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC13.22□□□□□ -0.29
TCRBV4S1A1TA0A5B7 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms