Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00959A0A1B0GUT2 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 AKR1C7P-201ENST00000305623 895 ntBASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 KRT18P27-201ENST00000427733 1299 ntBASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 CDC14C-201ENST00000428251 1719 ntBASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 AC073648.2-201ENST00000510116 352 ntBASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 AF238378.1-201ENST00000526806 358 ntBASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 PAM16-208ENST00000573553 722 ntTSL 2 BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 AC012569.1-201ENST00000591191 1524 ntBASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 AC008667.4-201ENST00000607370 168 ntBASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00959A0A1B0GUT2 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC11.21□□□□□ -0.61
LINC00959A0A1B0GUT2 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00959A0A1B0GUT2 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00959A0A1B0GUT2 LINC02447-202ENST00000501888 2146 ntBASIC11.21□□□□□ -0.61
LINC00959A0A1B0GUT2 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC11.21□□□□□ -0.61
LINC00959A0A1B0GUT2 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00959A0A1B0GUT2 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00959A0A1B0GUT2 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00959A0A1B0GUT2 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC11.21□□□□□ -0.61
LINC00959A0A1B0GUT2 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
LINC00959A0A1B0GUT2 MYB-201ENST00000316528 3571 ntTSL 5 BASIC11.21□□□□□ -0.61
LINC00959A0A1B0GUT2 MYB-241ENST00000616088 3573 ntTSL 5 BASIC11.21□□□□□ -0.61
LINC00959A0A1B0GUT2 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC11.21□□□□□ -0.61
LINC00959A0A1B0GUT2 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00959A0A1B0GUT2 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00959A0A1B0GUT2 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC11.21□□□□□ -0.61
LINC00959A0A1B0GUT2 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00959A0A1B0GUT2 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00959A0A1B0GUT2 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC11.21□□□□□ -0.61
LINC00959A0A1B0GUT2 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
LINC00959A0A1B0GUT2 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00959A0A1B0GUT2 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00959A0A1B0GUT2 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.61
LINC00959A0A1B0GUT2 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00959A0A1B0GUT2 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00959A0A1B0GUT2 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00959A0A1B0GUT2 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00959A0A1B0GUT2 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC11.21□□□□□ -0.61
LINC00959A0A1B0GUT2 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC11.21□□□□□ -0.61
LINC00959A0A1B0GUT2 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00959A0A1B0GUT2 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00959A0A1B0GUT2 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms