Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC26.76■■□□□ 1.87
BIVM-ERCC5R4GMW8 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
BIVM-ERCC5R4GMW8 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC26.76■■□□□ 1.87
BIVM-ERCC5R4GMW8 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC26.76■■□□□ 1.87
BIVM-ERCC5R4GMW8 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
BIVM-ERCC5R4GMW8 RIT1-205ENST00000539040 919 ntTSL 2 BASIC26.76■■□□□ 1.87
BIVM-ERCC5R4GMW8 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC26.76■■□□□ 1.87
BIVM-ERCC5R4GMW8 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC26.76■■□□□ 1.87
BIVM-ERCC5R4GMW8 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC26.75■■□□□ 1.87
BIVM-ERCC5R4GMW8 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
BIVM-ERCC5R4GMW8 AL121723.1-201ENST00000445194 1519 ntBASIC26.75■■□□□ 1.87
BIVM-ERCC5R4GMW8 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
BIVM-ERCC5R4GMW8 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
BIVM-ERCC5R4GMW8 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
BIVM-ERCC5R4GMW8 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC26.75■■□□□ 1.87
BIVM-ERCC5R4GMW8 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC26.75■■□□□ 1.87
BIVM-ERCC5R4GMW8 TEX30-203ENST00000376022 828 ntTSL 2 BASIC26.75■■□□□ 1.87
BIVM-ERCC5R4GMW8 AC134915.1-201ENST00000426461 574 ntBASIC26.75■■□□□ 1.87
BIVM-ERCC5R4GMW8 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC26.75■■□□□ 1.87
BIVM-ERCC5R4GMW8 AL355864.2-201ENST00000447420 863 ntBASIC26.75■■□□□ 1.87
BIVM-ERCC5R4GMW8 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC26.75■■□□□ 1.87
BIVM-ERCC5R4GMW8 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC26.75■■□□□ 1.87
BIVM-ERCC5R4GMW8 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC26.75■■□□□ 1.87
BIVM-ERCC5R4GMW8 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC26.75■■□□□ 1.87
BIVM-ERCC5R4GMW8 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC26.75■■□□□ 1.87
BIVM-ERCC5R4GMW8 DUX4L45-201ENST00000566406 1057 ntBASIC26.75■■□□□ 1.87
BIVM-ERCC5R4GMW8 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC26.75■■□□□ 1.87
BIVM-ERCC5R4GMW8 AC009542.2-202ENST00000619004 1067 ntBASIC26.75■■□□□ 1.87
BIVM-ERCC5R4GMW8 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
BIVM-ERCC5R4GMW8 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
BIVM-ERCC5R4GMW8 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
BIVM-ERCC5R4GMW8 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
BIVM-ERCC5R4GMW8 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
BIVM-ERCC5R4GMW8 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
BIVM-ERCC5R4GMW8 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
BIVM-ERCC5R4GMW8 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
BIVM-ERCC5R4GMW8 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
BIVM-ERCC5R4GMW8 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
BIVM-ERCC5R4GMW8 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
BIVM-ERCC5R4GMW8 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
BIVM-ERCC5R4GMW8 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
BIVM-ERCC5R4GMW8 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
BIVM-ERCC5R4GMW8 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC26.74■■□□□ 1.87
BIVM-ERCC5R4GMW8 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
BIVM-ERCC5R4GMW8 ACTBP11-201ENST00000436287 1126 ntBASIC26.74■■□□□ 1.87
BIVM-ERCC5R4GMW8 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC26.74■■□□□ 1.87
BIVM-ERCC5R4GMW8 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC26.74■■□□□ 1.87
BIVM-ERCC5R4GMW8 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC26.74■■□□□ 1.87
BIVM-ERCC5R4GMW8 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC26.74■■□□□ 1.87
BIVM-ERCC5R4GMW8 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC26.74■■□□□ 1.87
BIVM-ERCC5R4GMW8 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
BIVM-ERCC5R4GMW8 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
BIVM-ERCC5R4GMW8 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
BIVM-ERCC5R4GMW8 CEP83-AS1-201ENST00000623122 2482 ntBASIC26.73■■□□□ 1.87
BIVM-ERCC5R4GMW8 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
BIVM-ERCC5R4GMW8 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
BIVM-ERCC5R4GMW8 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
BIVM-ERCC5R4GMW8 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC26.73■■□□□ 1.87
BIVM-ERCC5R4GMW8 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
BIVM-ERCC5R4GMW8 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
BIVM-ERCC5R4GMW8 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
BIVM-ERCC5R4GMW8 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC26.73■■□□□ 1.87
BIVM-ERCC5R4GMW8 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC26.73■■□□□ 1.87
BIVM-ERCC5R4GMW8 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC26.73■■□□□ 1.87
BIVM-ERCC5R4GMW8 AC015910.1-201ENST00000579400 975 ntBASIC26.73■■□□□ 1.87
BIVM-ERCC5R4GMW8 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC26.73■■□□□ 1.87
BIVM-ERCC5R4GMW8 ATF5-205ENST00000600336 682 ntTSL 2 BASIC26.73■■□□□ 1.87
BIVM-ERCC5R4GMW8 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
BIVM-ERCC5R4GMW8 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
BIVM-ERCC5R4GMW8 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
BIVM-ERCC5R4GMW8 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC26.73■■□□□ 1.87
BIVM-ERCC5R4GMW8 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC26.73■■□□□ 1.87
BIVM-ERCC5R4GMW8 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
BIVM-ERCC5R4GMW8 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
BIVM-ERCC5R4GMW8 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
BIVM-ERCC5R4GMW8 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
BIVM-ERCC5R4GMW8 AL133338.1-201ENST00000565695 1517 ntBASIC26.73■■□□□ 1.87
BIVM-ERCC5R4GMW8 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
BIVM-ERCC5R4GMW8 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC26.72■■□□□ 1.87
BIVM-ERCC5R4GMW8 MGST3-203ENST00000367885 680 ntTSL 2 BASIC26.72■■□□□ 1.87
BIVM-ERCC5R4GMW8 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC26.72■■□□□ 1.87
BIVM-ERCC5R4GMW8 APOC3-202ENST00000375345 604 ntTSL 5 BASIC26.72■■□□□ 1.87
BIVM-ERCC5R4GMW8 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
BIVM-ERCC5R4GMW8 RPL13AP25-201ENST00000484130 612 ntBASIC26.72■■□□□ 1.87
BIVM-ERCC5R4GMW8 AC022137.2-201ENST00000503482 481 ntBASIC26.72■■□□□ 1.87
BIVM-ERCC5R4GMW8 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
BIVM-ERCC5R4GMW8 MIR6787-201ENST00000616675 61 ntBASIC26.72■■□□□ 1.87
BIVM-ERCC5R4GMW8 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC26.72■■□□□ 1.87
BIVM-ERCC5R4GMW8 MIR6869-201ENST00000619434 62 ntBASIC26.72■■□□□ 1.87
BIVM-ERCC5R4GMW8 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
BIVM-ERCC5R4GMW8 KRT8P44-201ENST00000441609 1350 ntBASIC26.72■■□□□ 1.87
BIVM-ERCC5R4GMW8 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC26.72■■□□□ 1.87
BIVM-ERCC5R4GMW8 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
BIVM-ERCC5R4GMW8 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
BIVM-ERCC5R4GMW8 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
BIVM-ERCC5R4GMW8 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
BIVM-ERCC5R4GMW8 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC26.72■■□□□ 1.87
BIVM-ERCC5R4GMW8 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC26.72■■□□□ 1.87
BIVM-ERCC5R4GMW8 AMT-233ENST00000636522 1620 ntTSL 2 BASIC26.72■■□□□ 1.87
BIVM-ERCC5R4GMW8 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms