Protein–RNA interactions for Protein: Q9ULM6

CNOT6, CCR4-NOT transcription complex subunit 6, humanhuman

Known RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT6Q9ULM6 AC004461.1-201ENST00000412461 403 ntBASIC16.48■□□□□ 0.23
CNOT6Q9ULM6 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CNOT6Q9ULM6 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.48■□□□□ 0.23
CNOT6Q9ULM6 AL135744.1-201ENST00000565098 629 ntBASIC16.48■□□□□ 0.23
CNOT6Q9ULM6 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNOT6Q9ULM6 AC016027.1-202ENST00000607927 1699 ntBASIC16.48■□□□□ 0.23
CNOT6Q9ULM6 AC022188.1-201ENST00000620960 1664 ntBASIC16.48■□□□□ 0.23
CNOT6Q9ULM6 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNOT6Q9ULM6 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.48■□□□□ 0.23
CNOT6Q9ULM6 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.48■□□□□ 0.23
CNOT6Q9ULM6 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.48■□□□□ 0.23
CNOT6Q9ULM6 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNOT6Q9ULM6 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
CNOT6Q9ULM6 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CNOT6Q9ULM6 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNOT6Q9ULM6 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNOT6Q9ULM6 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CNOT6Q9ULM6 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.48■□□□□ 0.23
CNOT6Q9ULM6 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNOT6Q9ULM6 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNOT6Q9ULM6 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNOT6Q9ULM6 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.48■□□□□ 0.23
CNOT6Q9ULM6 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.48■□□□□ 0.23
CNOT6Q9ULM6 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.48■□□□□ 0.23
CNOT6Q9ULM6 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNOT6Q9ULM6 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CNOT6Q9ULM6 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CNOT6Q9ULM6 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.47■□□□□ 0.23
CNOT6Q9ULM6 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
CNOT6Q9ULM6 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNOT6Q9ULM6 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNOT6Q9ULM6 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNOT6Q9ULM6 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.47■□□□□ 0.23
CNOT6Q9ULM6 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNOT6Q9ULM6 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CNOT6Q9ULM6 AL513523.2-202ENST00000427283 2040 ntBASIC16.47■□□□□ 0.23
CNOT6Q9ULM6 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.47■□□□□ 0.23
CNOT6Q9ULM6 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNOT6Q9ULM6 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNOT6Q9ULM6 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CNOT6Q9ULM6 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CNOT6Q9ULM6 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.47■□□□□ 0.23
CNOT6Q9ULM6 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.47■□□□□ 0.23
CNOT6Q9ULM6 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNOT6Q9ULM6 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.47■□□□□ 0.23
CNOT6Q9ULM6 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.47■□□□□ 0.23
CNOT6Q9ULM6 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNOT6Q9ULM6 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.47■□□□□ 0.23
CNOT6Q9ULM6 LINC01225-203ENST00000563550 1244 ntBASIC16.47■□□□□ 0.23
CNOT6Q9ULM6 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.47■□□□□ 0.23
CNOT6Q9ULM6 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.47■□□□□ 0.23
CNOT6Q9ULM6 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNOT6Q9ULM6 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNOT6Q9ULM6 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.47■□□□□ 0.23
CNOT6Q9ULM6 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.47■□□□□ 0.23
CNOT6Q9ULM6 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CNOT6Q9ULM6 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.47■□□□□ 0.23
CNOT6Q9ULM6 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.47■□□□□ 0.23
CNOT6Q9ULM6 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNOT6Q9ULM6 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNOT6Q9ULM6 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CNOT6Q9ULM6 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.47■□□□□ 0.23
CNOT6Q9ULM6 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNOT6Q9ULM6 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.47■□□□□ 0.23
CNOT6Q9ULM6 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.47■□□□□ 0.23
CNOT6Q9ULM6 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CNOT6Q9ULM6 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CNOT6Q9ULM6 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNOT6Q9ULM6 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNOT6Q9ULM6 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CNOT6Q9ULM6 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNOT6Q9ULM6 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CNOT6Q9ULM6 AC006538.1-201ENST00000567905 1585 ntBASIC16.47■□□□□ 0.23
CNOT6Q9ULM6 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNOT6Q9ULM6 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CNOT6Q9ULM6 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CNOT6Q9ULM6 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CNOT6Q9ULM6 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CNOT6Q9ULM6 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.46■□□□□ 0.23
CNOT6Q9ULM6 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CNOT6Q9ULM6 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CNOT6Q9ULM6 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CNOT6Q9ULM6 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.46■□□□□ 0.23
CNOT6Q9ULM6 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CNOT6Q9ULM6 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CNOT6Q9ULM6 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.46■□□□□ 0.23
CNOT6Q9ULM6 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CNOT6Q9ULM6 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CNOT6Q9ULM6 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.46■□□□□ 0.23
CNOT6Q9ULM6 CNN2P11-201ENST00000429351 262 ntBASIC16.46■□□□□ 0.23
CNOT6Q9ULM6 TIMM8BP1-201ENST00000452384 211 ntBASIC16.46■□□□□ 0.23
CNOT6Q9ULM6 AC079140.1-201ENST00000508039 487 ntBASIC16.46■□□□□ 0.23
CNOT6Q9ULM6 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.46■□□□□ 0.23
CNOT6Q9ULM6 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CNOT6Q9ULM6 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.46■□□□□ 0.23
CNOT6Q9ULM6 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.46■□□□□ 0.23
CNOT6Q9ULM6 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CNOT6Q9ULM6 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CNOT6Q9ULM6 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CNOT6Q9ULM6 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms