Protein–RNA interactions for Protein: Q9UJ41

RABGEF1, Rab5 GDP/GTP exchange factor, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RABGEF1Q9UJ41 MIR4492-201ENST00000581627 80 ntBASIC16.91■□□□□ 0.3
RABGEF1Q9UJ41 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.91■□□□□ 0.3
RABGEF1Q9UJ41 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.91■□□□□ 0.3
RABGEF1Q9UJ41 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.91■□□□□ 0.3
RABGEF1Q9UJ41 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RABGEF1Q9UJ41 AC092865.6-201ENST00000642101 219 ntBASIC16.91■□□□□ 0.3
RABGEF1Q9UJ41 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.91■□□□□ 0.3
RABGEF1Q9UJ41 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.91■□□□□ 0.3
RABGEF1Q9UJ41 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.91■□□□□ 0.3
RABGEF1Q9UJ41 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RABGEF1Q9UJ41 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RABGEF1Q9UJ41 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
RABGEF1Q9UJ41 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RABGEF1Q9UJ41 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RABGEF1Q9UJ41 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
RABGEF1Q9UJ41 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.91■□□□□ 0.3
RABGEF1Q9UJ41 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RABGEF1Q9UJ41 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.91■□□□□ 0.3
RABGEF1Q9UJ41 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RABGEF1Q9UJ41 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
RABGEF1Q9UJ41 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.9■□□□□ 0.3
RABGEF1Q9UJ41 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RABGEF1Q9UJ41 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RABGEF1Q9UJ41 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
RABGEF1Q9UJ41 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
RABGEF1Q9UJ41 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
RABGEF1Q9UJ41 AC103702.1-201ENST00000548801 2630 ntBASIC16.9■□□□□ 0.3
RABGEF1Q9UJ41 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RABGEF1Q9UJ41 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RABGEF1Q9UJ41 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RABGEF1Q9UJ41 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RABGEF1Q9UJ41 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RABGEF1Q9UJ41 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RABGEF1Q9UJ41 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RABGEF1Q9UJ41 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.9■□□□□ 0.3
RABGEF1Q9UJ41 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.9■□□□□ 0.3
RABGEF1Q9UJ41 CRYGEP-201ENST00000412192 528 ntBASIC16.9■□□□□ 0.3
RABGEF1Q9UJ41 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RABGEF1Q9UJ41 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.9■□□□□ 0.3
RABGEF1Q9UJ41 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.9■□□□□ 0.3
RABGEF1Q9UJ41 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RABGEF1Q9UJ41 IGHV3-65-201ENST00000523210 341 ntBASIC16.9■□□□□ 0.3
RABGEF1Q9UJ41 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.9■□□□□ 0.3
RABGEF1Q9UJ41 MIR4751-201ENST00000578027 74 ntBASIC16.9■□□□□ 0.3
RABGEF1Q9UJ41 MTDHP5-201ENST00000598980 586 ntBASIC16.9■□□□□ 0.3
RABGEF1Q9UJ41 AC004790.2-201ENST00000623588 572 ntBASIC16.9■□□□□ 0.3
RABGEF1Q9UJ41 TMEM14EP-202ENST00000639378 1296 ntBASIC16.9■□□□□ 0.3
RABGEF1Q9UJ41 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RABGEF1Q9UJ41 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RABGEF1Q9UJ41 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RABGEF1Q9UJ41 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.9■□□□□ 0.3
RABGEF1Q9UJ41 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RABGEF1Q9UJ41 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.9■□□□□ 0.3
RABGEF1Q9UJ41 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RABGEF1Q9UJ41 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RABGEF1Q9UJ41 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.9■□□□□ 0.3
RABGEF1Q9UJ41 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RABGEF1Q9UJ41 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.9■□□□□ 0.3
RABGEF1Q9UJ41 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
RABGEF1Q9UJ41 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.9■□□□□ 0.3
RABGEF1Q9UJ41 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RABGEF1Q9UJ41 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RABGEF1Q9UJ41 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.9■□□□□ 0.3
RABGEF1Q9UJ41 HYMAI-201ENST00000635591 3347 ntBASIC16.9■□□□□ 0.3
RABGEF1Q9UJ41 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RABGEF1Q9UJ41 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.89■□□□□ 0.3
RABGEF1Q9UJ41 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
RABGEF1Q9UJ41 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.89■□□□□ 0.3
RABGEF1Q9UJ41 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.89■□□□□ 0.3
RABGEF1Q9UJ41 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.89■□□□□ 0.29
RABGEF1Q9UJ41 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RABGEF1Q9UJ41 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.89■□□□□ 0.29
RABGEF1Q9UJ41 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.89■□□□□ 0.29
RABGEF1Q9UJ41 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RABGEF1Q9UJ41 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.89■□□□□ 0.29
RABGEF1Q9UJ41 KRT8P39-201ENST00000396270 1433 ntBASIC16.89■□□□□ 0.29
RABGEF1Q9UJ41 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RABGEF1Q9UJ41 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RABGEF1Q9UJ41 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RABGEF1Q9UJ41 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.89■□□□□ 0.29
RABGEF1Q9UJ41 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RABGEF1Q9UJ41 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.89■□□□□ 0.29
RABGEF1Q9UJ41 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RABGEF1Q9UJ41 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RABGEF1Q9UJ41 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RABGEF1Q9UJ41 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.89■□□□□ 0.29
RABGEF1Q9UJ41 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RABGEF1Q9UJ41 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.89■□□□□ 0.29
RABGEF1Q9UJ41 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.89■□□□□ 0.29
RABGEF1Q9UJ41 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.89■□□□□ 0.29
RABGEF1Q9UJ41 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.89■□□□□ 0.29
RABGEF1Q9UJ41 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.89■□□□□ 0.29
RABGEF1Q9UJ41 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.89■□□□□ 0.29
RABGEF1Q9UJ41 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.89■□□□□ 0.29
RABGEF1Q9UJ41 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.89■□□□□ 0.29
RABGEF1Q9UJ41 AC008667.4-201ENST00000607370 168 ntBASIC16.89■□□□□ 0.29
RABGEF1Q9UJ41 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.89■□□□□ 0.29
RABGEF1Q9UJ41 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
RABGEF1Q9UJ41 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
RABGEF1Q9UJ41 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms