Protein–RNA interactions for Protein: Q99633

PRPF18, Pre-mRNA-splicing factor 18, humanhuman

Known RBP Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18Q99633 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PRPF18Q99633 AL732292.2-201ENST00000609649 430 ntBASIC16.03■□□□□ 0.16
PRPF18Q99633 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.03■□□□□ 0.16
PRPF18Q99633 AL355877.3-201ENST00000622820 899 ntBASIC16.03■□□□□ 0.16
PRPF18Q99633 AF228730.7-201ENST00000641842 219 ntBASIC16.03■□□□□ 0.16
PRPF18Q99633 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRPF18Q99633 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.03■□□□□ 0.16
PRPF18Q99633 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRPF18Q99633 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRPF18Q99633 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.03■□□□□ 0.16
PRPF18Q99633 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRPF18Q99633 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
PRPF18Q99633 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PRPF18Q99633 AC067930.6-201ENST00000623257 4947 ntBASIC16.03■□□□□ 0.16
PRPF18Q99633 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
PRPF18Q99633 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
PRPF18Q99633 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PRPF18Q99633 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PRPF18Q99633 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PRPF18Q99633 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRPF18Q99633 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PRPF18Q99633 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.02■□□□□ 0.16
PRPF18Q99633 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PRPF18Q99633 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PRPF18Q99633 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.02■□□□□ 0.16
PRPF18Q99633 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
PRPF18Q99633 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
PRPF18Q99633 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.02■□□□□ 0.16
PRPF18Q99633 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PRPF18Q99633 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.02■□□□□ 0.16
PRPF18Q99633 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PRPF18Q99633 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
PRPF18Q99633 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.02■□□□□ 0.16
PRPF18Q99633 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
PRPF18Q99633 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
PRPF18Q99633 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PRPF18Q99633 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PRPF18Q99633 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PRPF18Q99633 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PRPF18Q99633 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PRPF18Q99633 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.02■□□□□ 0.16
PRPF18Q99633 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.02■□□□□ 0.16
PRPF18Q99633 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
PRPF18Q99633 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PRPF18Q99633 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
PRPF18Q99633 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
PRPF18Q99633 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
PRPF18Q99633 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PRPF18Q99633 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
PRPF18Q99633 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PRPF18Q99633 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.02■□□□□ 0.15
PRPF18Q99633 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.02■□□□□ 0.15
PRPF18Q99633 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.02■□□□□ 0.15
PRPF18Q99633 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PRPF18Q99633 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PRPF18Q99633 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PRPF18Q99633 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
PRPF18Q99633 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.02■□□□□ 0.15
PRPF18Q99633 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.02■□□□□ 0.15
PRPF18Q99633 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRPF18Q99633 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PRPF18Q99633 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.01■□□□□ 0.15
PRPF18Q99633 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PRPF18Q99633 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRPF18Q99633 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRPF18Q99633 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.01■□□□□ 0.15
PRPF18Q99633 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.01■□□□□ 0.15
PRPF18Q99633 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRPF18Q99633 TNRC18P2-201ENST00000417666 2714 ntBASIC16.01■□□□□ 0.15
PRPF18Q99633 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.01■□□□□ 0.15
PRPF18Q99633 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.01■□□□□ 0.15
PRPF18Q99633 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRPF18Q99633 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.01■□□□□ 0.15
PRPF18Q99633 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.01■□□□□ 0.15
PRPF18Q99633 HCG4P8-203ENST00000443049 980 ntBASIC16.01■□□□□ 0.15
PRPF18Q99633 KRT18P31-201ENST00000506277 1292 ntBASIC16.01■□□□□ 0.15
PRPF18Q99633 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.01■□□□□ 0.15
PRPF18Q99633 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
PRPF18Q99633 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PRPF18Q99633 AC091304.2-201ENST00000564639 760 ntBASIC16.01■□□□□ 0.15
PRPF18Q99633 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.01■□□□□ 0.15
PRPF18Q99633 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.01■□□□□ 0.15
PRPF18Q99633 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRPF18Q99633 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.01■□□□□ 0.15
PRPF18Q99633 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.01■□□□□ 0.15
PRPF18Q99633 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.01■□□□□ 0.15
PRPF18Q99633 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
PRPF18Q99633 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRPF18Q99633 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.01■□□□□ 0.15
PRPF18Q99633 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.01■□□□□ 0.15
PRPF18Q99633 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PRPF18Q99633 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
PRPF18Q99633 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRPF18Q99633 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRPF18Q99633 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.01■□□□□ 0.15
PRPF18Q99633 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PRPF18Q99633 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16■□□□□ 0.15
PRPF18Q99633 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PRPF18Q99633 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16■□□□□ 0.15
PRPF18Q99633 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms