Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDLIM5Q96HC4 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.01■□□□□ 0.15
PDLIM5Q96HC4 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDLIM5Q96HC4 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PDLIM5Q96HC4 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDLIM5Q96HC4 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDLIM5Q96HC4 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
PDLIM5Q96HC4 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.01■□□□□ 0.15
PDLIM5Q96HC4 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.01■□□□□ 0.15
PDLIM5Q96HC4 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDLIM5Q96HC4 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.01■□□□□ 0.15
PDLIM5Q96HC4 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PDLIM5Q96HC4 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDLIM5Q96HC4 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.01■□□□□ 0.15
PDLIM5Q96HC4 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.01■□□□□ 0.15
PDLIM5Q96HC4 RARRES2P8-201ENST00000566335 367 ntBASIC16.01■□□□□ 0.15
PDLIM5Q96HC4 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.01■□□□□ 0.15
PDLIM5Q96HC4 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PDLIM5Q96HC4 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.01■□□□□ 0.15
PDLIM5Q96HC4 AC010491.1-201ENST00000563101 2797 ntBASIC16.01■□□□□ 0.15
PDLIM5Q96HC4 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.01■□□□□ 0.15
PDLIM5Q96HC4 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDLIM5Q96HC4 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDLIM5Q96HC4 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PDLIM5Q96HC4 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PDLIM5Q96HC4 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDLIM5Q96HC4 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
PDLIM5Q96HC4 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDLIM5Q96HC4 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PDLIM5Q96HC4 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
PDLIM5Q96HC4 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
PDLIM5Q96HC4 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
PDLIM5Q96HC4 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
PDLIM5Q96HC4 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
PDLIM5Q96HC4 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PDLIM5Q96HC4 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16■□□□□ 0.15
PDLIM5Q96HC4 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PDLIM5Q96HC4 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PDLIM5Q96HC4 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16■□□□□ 0.15
PDLIM5Q96HC4 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PDLIM5Q96HC4 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16■□□□□ 0.15
PDLIM5Q96HC4 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
PDLIM5Q96HC4 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16■□□□□ 0.15
PDLIM5Q96HC4 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PDLIM5Q96HC4 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
PDLIM5Q96HC4 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16■□□□□ 0.15
PDLIM5Q96HC4 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16■□□□□ 0.15
PDLIM5Q96HC4 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16■□□□□ 0.15
PDLIM5Q96HC4 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
PDLIM5Q96HC4 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PDLIM5Q96HC4 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16■□□□□ 0.15
PDLIM5Q96HC4 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
PDLIM5Q96HC4 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16■□□□□ 0.15
PDLIM5Q96HC4 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16■□□□□ 0.15
PDLIM5Q96HC4 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
PDLIM5Q96HC4 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16■□□□□ 0.15
PDLIM5Q96HC4 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16■□□□□ 0.15
PDLIM5Q96HC4 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16■□□□□ 0.15
PDLIM5Q96HC4 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PDLIM5Q96HC4 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16■□□□□ 0.15
PDLIM5Q96HC4 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16■□□□□ 0.15
PDLIM5Q96HC4 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16■□□□□ 0.15
PDLIM5Q96HC4 MIR4321-201ENST00000592276 80 ntBASIC16■□□□□ 0.15
PDLIM5Q96HC4 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16■□□□□ 0.15
PDLIM5Q96HC4 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PDLIM5Q96HC4 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PDLIM5Q96HC4 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16■□□□□ 0.15
PDLIM5Q96HC4 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PDLIM5Q96HC4 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16■□□□□ 0.15
PDLIM5Q96HC4 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PDLIM5Q96HC4 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PDLIM5Q96HC4 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PDLIM5Q96HC4 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PDLIM5Q96HC4 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16■□□□□ 0.15
PDLIM5Q96HC4 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
PDLIM5Q96HC4 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16■□□□□ 0.15
PDLIM5Q96HC4 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.99■□□□□ 0.15
PDLIM5Q96HC4 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.99■□□□□ 0.15
PDLIM5Q96HC4 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.99■□□□□ 0.15
PDLIM5Q96HC4 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.99■□□□□ 0.15
PDLIM5Q96HC4 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PDLIM5Q96HC4 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDLIM5Q96HC4 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDLIM5Q96HC4 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.99■□□□□ 0.15
PDLIM5Q96HC4 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.99■□□□□ 0.15
PDLIM5Q96HC4 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
PDLIM5Q96HC4 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
PDLIM5Q96HC4 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDLIM5Q96HC4 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
PDLIM5Q96HC4 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.99■□□□□ 0.15
PDLIM5Q96HC4 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDLIM5Q96HC4 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
PDLIM5Q96HC4 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PDLIM5Q96HC4 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.99■□□□□ 0.15
PDLIM5Q96HC4 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.99■□□□□ 0.15
PDLIM5Q96HC4 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.99■□□□□ 0.15
PDLIM5Q96HC4 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.99■□□□□ 0.15
PDLIM5Q96HC4 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDLIM5Q96HC4 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PDLIM5Q96HC4 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms