Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP6Q96FZ7 AL512652.2-201ENST00000625156 1716 ntBASIC16.6■□□□□ 0.25
CHMP6Q96FZ7 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP6Q96FZ7 POU5F1P6-201ENST00000466990 990 ntBASIC16.6■□□□□ 0.25
CHMP6Q96FZ7 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.6■□□□□ 0.25
CHMP6Q96FZ7 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.6■□□□□ 0.25
CHMP6Q96FZ7 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CHMP6Q96FZ7 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP6Q96FZ7 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP6Q96FZ7 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP6Q96FZ7 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.6■□□□□ 0.25
CHMP6Q96FZ7 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP6Q96FZ7 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP6Q96FZ7 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.6■□□□□ 0.25
CHMP6Q96FZ7 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP6Q96FZ7 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP6Q96FZ7 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP6Q96FZ7 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.6■□□□□ 0.25
CHMP6Q96FZ7 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.6■□□□□ 0.25
CHMP6Q96FZ7 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
CHMP6Q96FZ7 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP6Q96FZ7 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP6Q96FZ7 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP6Q96FZ7 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.59■□□□□ 0.25
CHMP6Q96FZ7 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP6Q96FZ7 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP6Q96FZ7 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CHMP6Q96FZ7 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP6Q96FZ7 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.59■□□□□ 0.25
CHMP6Q96FZ7 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.59■□□□□ 0.25
CHMP6Q96FZ7 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP6Q96FZ7 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.59■□□□□ 0.25
CHMP6Q96FZ7 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CHMP6Q96FZ7 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.59■□□□□ 0.25
CHMP6Q96FZ7 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.59■□□□□ 0.25
CHMP6Q96FZ7 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP6Q96FZ7 FAM220CP-201ENST00000395253 831 ntBASIC16.59■□□□□ 0.25
CHMP6Q96FZ7 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP6Q96FZ7 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.59■□□□□ 0.25
CHMP6Q96FZ7 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
CHMP6Q96FZ7 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.59■□□□□ 0.25
CHMP6Q96FZ7 AL390719.2-201ENST00000606993 987 ntBASIC16.59■□□□□ 0.25
CHMP6Q96FZ7 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP6Q96FZ7 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CHMP6Q96FZ7 AC125634.1-201ENST00000438758 1403 ntBASIC16.59■□□□□ 0.25
CHMP6Q96FZ7 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CHMP6Q96FZ7 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP6Q96FZ7 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CHMP6Q96FZ7 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP6Q96FZ7 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CHMP6Q96FZ7 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP6Q96FZ7 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP6Q96FZ7 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.59■□□□□ 0.25
CHMP6Q96FZ7 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP6Q96FZ7 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC16.59■□□□□ 0.25
CHMP6Q96FZ7 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
CHMP6Q96FZ7 SNX33P1-201ENST00000592116 1762 ntBASIC16.59■□□□□ 0.25
CHMP6Q96FZ7 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP6Q96FZ7 AC007292.2-201ENST00000593524 1812 ntBASIC16.59■□□□□ 0.25
CHMP6Q96FZ7 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP6Q96FZ7 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.58■□□□□ 0.25
CHMP6Q96FZ7 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.58■□□□□ 0.25
CHMP6Q96FZ7 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.25
CHMP6Q96FZ7 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CHMP6Q96FZ7 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CHMP6Q96FZ7 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CHMP6Q96FZ7 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CHMP6Q96FZ7 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CHMP6Q96FZ7 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CHMP6Q96FZ7 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CHMP6Q96FZ7 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.58■□□□□ 0.25
CHMP6Q96FZ7 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CHMP6Q96FZ7 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHMP6Q96FZ7 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHMP6Q96FZ7 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.58■□□□□ 0.24
CHMP6Q96FZ7 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
CHMP6Q96FZ7 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CHMP6Q96FZ7 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.58■□□□□ 0.24
CHMP6Q96FZ7 AP002414.1-201ENST00000391405 1147 ntBASIC16.58■□□□□ 0.24
CHMP6Q96FZ7 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CHMP6Q96FZ7 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.58■□□□□ 0.24
CHMP6Q96FZ7 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CHMP6Q96FZ7 GUSBP12-201ENST00000513727 720 ntBASIC16.58■□□□□ 0.24
CHMP6Q96FZ7 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.24
CHMP6Q96FZ7 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.58■□□□□ 0.24
CHMP6Q96FZ7 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.58■□□□□ 0.24
CHMP6Q96FZ7 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.58■□□□□ 0.24
CHMP6Q96FZ7 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.58■□□□□ 0.24
CHMP6Q96FZ7 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
CHMP6Q96FZ7 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CHMP6Q96FZ7 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHMP6Q96FZ7 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHMP6Q96FZ7 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHMP6Q96FZ7 AC132938.5-201ENST00000624980 1813 ntBASIC16.58■□□□□ 0.24
CHMP6Q96FZ7 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHMP6Q96FZ7 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CHMP6Q96FZ7 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.58■□□□□ 0.24
CHMP6Q96FZ7 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
CHMP6Q96FZ7 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHMP6Q96FZ7 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms