Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PTP4A1Q93096 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PTP4A1Q93096 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.8□□□□□ -0.04
PTP4A1Q93096 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTP4A1Q93096 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.8□□□□□ -0.04
PTP4A1Q93096 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTP4A1Q93096 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PTP4A1Q93096 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.8□□□□□ -0.04
PTP4A1Q93096 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
PTP4A1Q93096 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PTP4A1Q93096 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PTP4A1Q93096 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PTP4A1Q93096 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PTP4A1Q93096 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PTP4A1Q93096 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PTP4A1Q93096 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PTP4A1Q93096 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PTP4A1Q93096 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PTP4A1Q93096 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
PTP4A1Q93096 AC073621.1-201ENST00000392730 636 ntBASIC14.79□□□□□ -0.04
PTP4A1Q93096 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.79□□□□□ -0.04
PTP4A1Q93096 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
PTP4A1Q93096 HCG4-201ENST00000418983 998 ntBASIC14.79□□□□□ -0.04
PTP4A1Q93096 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.79□□□□□ -0.04
PTP4A1Q93096 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.79□□□□□ -0.04
PTP4A1Q93096 AC079781.3-201ENST00000449110 356 ntBASIC14.79□□□□□ -0.04
PTP4A1Q93096 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.79□□□□□ -0.04
PTP4A1Q93096 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.79□□□□□ -0.04
PTP4A1Q93096 RPS15P9-201ENST00000494093 319 ntBASIC14.79□□□□□ -0.04
PTP4A1Q93096 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
PTP4A1Q93096 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.79□□□□□ -0.04
PTP4A1Q93096 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.79□□□□□ -0.04
PTP4A1Q93096 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.79□□□□□ -0.04
PTP4A1Q93096 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.79□□□□□ -0.04
PTP4A1Q93096 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PTP4A1Q93096 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
PTP4A1Q93096 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.79□□□□□ -0.04
PTP4A1Q93096 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.79□□□□□ -0.04
PTP4A1Q93096 AC069224.1-201ENST00000566372 1715 ntBASIC14.79□□□□□ -0.04
PTP4A1Q93096 AC006557.2-201ENST00000592985 1240 ntBASIC14.79□□□□□ -0.04
PTP4A1Q93096 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.79□□□□□ -0.04
PTP4A1Q93096 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC14.79□□□□□ -0.04
PTP4A1Q93096 AL031008.1-201ENST00000619963 541 ntBASIC14.79□□□□□ -0.04
PTP4A1Q93096 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PTP4A1Q93096 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PTP4A1Q93096 PRAL-201ENST00000624952 3286 ntBASIC14.79□□□□□ -0.04
PTP4A1Q93096 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PTP4A1Q93096 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
PTP4A1Q93096 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PTP4A1Q93096 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PTP4A1Q93096 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
PTP4A1Q93096 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PTP4A1Q93096 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PTP4A1Q93096 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.78□□□□□ -0.04
PTP4A1Q93096 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
PTP4A1Q93096 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PTP4A1Q93096 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PTP4A1Q93096 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PTP4A1Q93096 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PTP4A1Q93096 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PTP4A1Q93096 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.78□□□□□ -0.04
PTP4A1Q93096 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PTP4A1Q93096 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.78□□□□□ -0.04
PTP4A1Q93096 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
PTP4A1Q93096 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PTP4A1Q93096 KRT18P27-201ENST00000427733 1299 ntBASIC14.78□□□□□ -0.04
PTP4A1Q93096 KRT18P67-201ENST00000432816 1264 ntBASIC14.78□□□□□ -0.04
PTP4A1Q93096 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.78□□□□□ -0.04
PTP4A1Q93096 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.78□□□□□ -0.04
PTP4A1Q93096 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.78□□□□□ -0.04
PTP4A1Q93096 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
PTP4A1Q93096 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.78□□□□□ -0.04
PTP4A1Q93096 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.78□□□□□ -0.04
PTP4A1Q93096 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.78□□□□□ -0.04
PTP4A1Q93096 AC104692.2-201ENST00000603054 253 ntBASIC14.78□□□□□ -0.04
PTP4A1Q93096 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PTP4A1Q93096 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.78□□□□□ -0.04
PTP4A1Q93096 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PTP4A1Q93096 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PTP4A1Q93096 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
PTP4A1Q93096 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.78□□□□□ -0.04
PTP4A1Q93096 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PTP4A1Q93096 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PTP4A1Q93096 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PTP4A1Q93096 AC005622.1-201ENST00000636801 1703 ntBASIC14.78□□□□□ -0.04
PTP4A1Q93096 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
PTP4A1Q93096 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PTP4A1Q93096 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PTP4A1Q93096 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PTP4A1Q93096 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PTP4A1Q93096 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PTP4A1Q93096 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.77□□□□□ -0.04
PTP4A1Q93096 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PTP4A1Q93096 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.77□□□□□ -0.04
PTP4A1Q93096 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
PTP4A1Q93096 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PTP4A1Q93096 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PTP4A1Q93096 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
PTP4A1Q93096 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PTP4A1Q93096 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms