Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM4Q8WVI0 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.07□□□□□ -0.16
SMIM4Q8WVI0 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.07□□□□□ -0.16
SMIM4Q8WVI0 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM4Q8WVI0 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM4Q8WVI0 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM4Q8WVI0 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM4Q8WVI0 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM4Q8WVI0 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM4Q8WVI0 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.07□□□□□ -0.16
SMIM4Q8WVI0 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SMIM4Q8WVI0 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM4Q8WVI0 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.07□□□□□ -0.16
SMIM4Q8WVI0 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM4Q8WVI0 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM4Q8WVI0 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.07□□□□□ -0.16
SMIM4Q8WVI0 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM4Q8WVI0 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
SMIM4Q8WVI0 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SMIM4Q8WVI0 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
SMIM4Q8WVI0 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM4Q8WVI0 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM4Q8WVI0 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM4Q8WVI0 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SMIM4Q8WVI0 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM4Q8WVI0 AC008677.1-201ENST00000519230 1561 ntBASIC14.06□□□□□ -0.16
SMIM4Q8WVI0 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SMIM4Q8WVI0 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM4Q8WVI0 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM4Q8WVI0 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.06□□□□□ -0.16
SMIM4Q8WVI0 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM4Q8WVI0 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM4Q8WVI0 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM4Q8WVI0 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM4Q8WVI0 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM4Q8WVI0 AC026396.1-201ENST00000419388 421 ntBASIC14.06□□□□□ -0.16
SMIM4Q8WVI0 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.06□□□□□ -0.16
SMIM4Q8WVI0 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM4Q8WVI0 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC14.06□□□□□ -0.16
SMIM4Q8WVI0 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.06□□□□□ -0.16
SMIM4Q8WVI0 AC008550.1-201ENST00000511500 884 ntBASIC14.06□□□□□ -0.16
SMIM4Q8WVI0 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM4Q8WVI0 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC14.06□□□□□ -0.16
SMIM4Q8WVI0 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SMIM4Q8WVI0 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM4Q8WVI0 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM4Q8WVI0 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM4Q8WVI0 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM4Q8WVI0 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM4Q8WVI0 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM4Q8WVI0 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM4Q8WVI0 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM4Q8WVI0 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM4Q8WVI0 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.06□□□□□ -0.16
SMIM4Q8WVI0 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM4Q8WVI0 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM4Q8WVI0 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM4Q8WVI0 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.06□□□□□ -0.16
SMIM4Q8WVI0 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM4Q8WVI0 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM4Q8WVI0 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM4Q8WVI0 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMIM4Q8WVI0 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.06□□□□□ -0.16
SMIM4Q8WVI0 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.06□□□□□ -0.16
SMIM4Q8WVI0 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMIM4Q8WVI0 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.05□□□□□ -0.16
SMIM4Q8WVI0 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.05□□□□□ -0.16
SMIM4Q8WVI0 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.05□□□□□ -0.16
SMIM4Q8WVI0 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMIM4Q8WVI0 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMIM4Q8WVI0 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMIM4Q8WVI0 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
SMIM4Q8WVI0 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.05□□□□□ -0.16
SMIM4Q8WVI0 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.05□□□□□ -0.16
SMIM4Q8WVI0 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SMIM4Q8WVI0 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
SMIM4Q8WVI0 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMIM4Q8WVI0 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMIM4Q8WVI0 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.05□□□□□ -0.16
SMIM4Q8WVI0 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.05□□□□□ -0.16
SMIM4Q8WVI0 MIR935-201ENST00000401179 91 ntBASIC14.05□□□□□ -0.16
SMIM4Q8WVI0 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
SMIM4Q8WVI0 SPDYE21P-201ENST00000413323 827 ntBASIC14.05□□□□□ -0.16
SMIM4Q8WVI0 AC246785.2-201ENST00000432512 513 ntBASIC14.05□□□□□ -0.16
SMIM4Q8WVI0 SLC25A3P1-201ENST00000443844 931 ntBASIC14.05□□□□□ -0.16
SMIM4Q8WVI0 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.05□□□□□ -0.16
SMIM4Q8WVI0 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMIM4Q8WVI0 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMIM4Q8WVI0 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
SMIM4Q8WVI0 AC011558.1-201ENST00000623459 338 ntBASIC14.05□□□□□ -0.16
SMIM4Q8WVI0 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SMIM4Q8WVI0 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.05□□□□□ -0.16
SMIM4Q8WVI0 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMIM4Q8WVI0 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
SMIM4Q8WVI0 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMIM4Q8WVI0 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMIM4Q8WVI0 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMIM4Q8WVI0 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SMIM4Q8WVI0 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMIM4Q8WVI0 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms