Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.46■□□□□ 0.23
RAB3IL1Q8TBN0 MIR4492-201ENST00000581627 80 ntBASIC16.46■□□□□ 0.23
RAB3IL1Q8TBN0 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RAB3IL1Q8TBN0 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.46■□□□□ 0.23
RAB3IL1Q8TBN0 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAB3IL1Q8TBN0 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAB3IL1Q8TBN0 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAB3IL1Q8TBN0 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
RAB3IL1Q8TBN0 LINC02447-202ENST00000501888 2146 ntBASIC16.46■□□□□ 0.23
RAB3IL1Q8TBN0 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
RAB3IL1Q8TBN0 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAB3IL1Q8TBN0 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAB3IL1Q8TBN0 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAB3IL1Q8TBN0 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
RAB3IL1Q8TBN0 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
RAB3IL1Q8TBN0 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
RAB3IL1Q8TBN0 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
RAB3IL1Q8TBN0 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
RAB3IL1Q8TBN0 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
RAB3IL1Q8TBN0 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
RAB3IL1Q8TBN0 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.45■□□□□ 0.22
RAB3IL1Q8TBN0 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB3IL1Q8TBN0 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.45■□□□□ 0.22
RAB3IL1Q8TBN0 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
RAB3IL1Q8TBN0 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB3IL1Q8TBN0 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB3IL1Q8TBN0 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB3IL1Q8TBN0 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB3IL1Q8TBN0 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB3IL1Q8TBN0 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.45■□□□□ 0.22
RAB3IL1Q8TBN0 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB3IL1Q8TBN0 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RAB3IL1Q8TBN0 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.45■□□□□ 0.22
RAB3IL1Q8TBN0 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB3IL1Q8TBN0 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.45■□□□□ 0.22
RAB3IL1Q8TBN0 AP005901.3-202ENST00000581653 237 ntBASIC16.45■□□□□ 0.22
RAB3IL1Q8TBN0 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB3IL1Q8TBN0 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.45■□□□□ 0.22
RAB3IL1Q8TBN0 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
RAB3IL1Q8TBN0 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB3IL1Q8TBN0 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RAB3IL1Q8TBN0 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB3IL1Q8TBN0 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RAB3IL1Q8TBN0 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RAB3IL1Q8TBN0 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.45■□□□□ 0.22
RAB3IL1Q8TBN0 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
RAB3IL1Q8TBN0 PCGF3-213ENST00000620529 1899 ntBASIC16.45■□□□□ 0.22
RAB3IL1Q8TBN0 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RAB3IL1Q8TBN0 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB3IL1Q8TBN0 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.45■□□□□ 0.22
RAB3IL1Q8TBN0 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB3IL1Q8TBN0 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
RAB3IL1Q8TBN0 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.45■□□□□ 0.22
RAB3IL1Q8TBN0 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB3IL1Q8TBN0 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC16.45■□□□□ 0.22
RAB3IL1Q8TBN0 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB3IL1Q8TBN0 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.45■□□□□ 0.22
RAB3IL1Q8TBN0 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RAB3IL1Q8TBN0 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAB3IL1Q8TBN0 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
RAB3IL1Q8TBN0 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RAB3IL1Q8TBN0 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAB3IL1Q8TBN0 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAB3IL1Q8TBN0 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.44■□□□□ 0.22
RAB3IL1Q8TBN0 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAB3IL1Q8TBN0 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAB3IL1Q8TBN0 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RAB3IL1Q8TBN0 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAB3IL1Q8TBN0 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAB3IL1Q8TBN0 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAB3IL1Q8TBN0 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.44■□□□□ 0.22
RAB3IL1Q8TBN0 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
RAB3IL1Q8TBN0 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAB3IL1Q8TBN0 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.44■□□□□ 0.22
RAB3IL1Q8TBN0 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAB3IL1Q8TBN0 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RAB3IL1Q8TBN0 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAB3IL1Q8TBN0 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.44■□□□□ 0.22
RAB3IL1Q8TBN0 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.44■□□□□ 0.22
RAB3IL1Q8TBN0 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.44■□□□□ 0.22
RAB3IL1Q8TBN0 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.44■□□□□ 0.22
RAB3IL1Q8TBN0 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
RAB3IL1Q8TBN0 AL353135.1-201ENST00000606729 504 ntBASIC16.44■□□□□ 0.22
RAB3IL1Q8TBN0 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAB3IL1Q8TBN0 AL358472.4-201ENST00000633140 710 ntBASIC16.44■□□□□ 0.22
RAB3IL1Q8TBN0 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAB3IL1Q8TBN0 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RAB3IL1Q8TBN0 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAB3IL1Q8TBN0 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAB3IL1Q8TBN0 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.44■□□□□ 0.22
RAB3IL1Q8TBN0 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
RAB3IL1Q8TBN0 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAB3IL1Q8TBN0 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.44■□□□□ 0.22
RAB3IL1Q8TBN0 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB3IL1Q8TBN0 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.43■□□□□ 0.22
RAB3IL1Q8TBN0 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
RAB3IL1Q8TBN0 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB3IL1Q8TBN0 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RAB3IL1Q8TBN0 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.43■□□□□ 0.22
RAB3IL1Q8TBN0 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms