Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14□□□□□ -0.17
CLDND2Q8NHS1 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLDND2Q8NHS1 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14□□□□□ -0.17
CLDND2Q8NHS1 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLDND2Q8NHS1 AC092068.3-201ENST00000587894 2016 ntBASIC14□□□□□ -0.17
CLDND2Q8NHS1 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14□□□□□ -0.17
CLDND2Q8NHS1 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
CLDND2Q8NHS1 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CLDND2Q8NHS1 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLDND2Q8NHS1 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLDND2Q8NHS1 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14□□□□□ -0.17
CLDND2Q8NHS1 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLDND2Q8NHS1 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CLDND2Q8NHS1 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14□□□□□ -0.17
CLDND2Q8NHS1 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLDND2Q8NHS1 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLDND2Q8NHS1 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLDND2Q8NHS1 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLDND2Q8NHS1 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CLDND2Q8NHS1 HNRNPFP1-201ENST00000391730 1133 ntBASIC14□□□□□ -0.17
CLDND2Q8NHS1 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14□□□□□ -0.17
CLDND2Q8NHS1 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14□□□□□ -0.17
CLDND2Q8NHS1 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLDND2Q8NHS1 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLDND2Q8NHS1 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14□□□□□ -0.17
CLDND2Q8NHS1 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CLDND2Q8NHS1 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLDND2Q8NHS1 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLDND2Q8NHS1 AC109635.5-201ENST00000533593 962 ntBASIC14□□□□□ -0.17
CLDND2Q8NHS1 AC087641.1-201ENST00000557561 1021 ntBASIC14□□□□□ -0.17
CLDND2Q8NHS1 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14□□□□□ -0.17
CLDND2Q8NHS1 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14□□□□□ -0.17
CLDND2Q8NHS1 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14□□□□□ -0.17
CLDND2Q8NHS1 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLDND2Q8NHS1 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14□□□□□ -0.17
CLDND2Q8NHS1 AL031055.1-201ENST00000606362 631 ntBASIC14□□□□□ -0.17
CLDND2Q8NHS1 AP001350.2-201ENST00000625104 1094 ntBASIC14□□□□□ -0.17
CLDND2Q8NHS1 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLDND2Q8NHS1 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLDND2Q8NHS1 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CLDND2Q8NHS1 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLDND2Q8NHS1 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLDND2Q8NHS1 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14□□□□□ -0.17
CLDND2Q8NHS1 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
CLDND2Q8NHS1 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14□□□□□ -0.17
CLDND2Q8NHS1 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CLDND2Q8NHS1 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CLDND2Q8NHS1 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14□□□□□ -0.17
CLDND2Q8NHS1 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14□□□□□ -0.17
CLDND2Q8NHS1 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLDND2Q8NHS1 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CLDND2Q8NHS1 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLDND2Q8NHS1 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14□□□□□ -0.17
CLDND2Q8NHS1 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLDND2Q8NHS1 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDND2Q8NHS1 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC13.99□□□□□ -0.17
CLDND2Q8NHS1 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDND2Q8NHS1 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.99□□□□□ -0.17
CLDND2Q8NHS1 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDND2Q8NHS1 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDND2Q8NHS1 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CLDND2Q8NHS1 AL021920.2-201ENST00000624828 1351 ntBASIC13.99□□□□□ -0.17
CLDND2Q8NHS1 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CLDND2Q8NHS1 AC105917.1-201ENST00000506637 2539 ntBASIC13.99□□□□□ -0.17
CLDND2Q8NHS1 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDND2Q8NHS1 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.99□□□□□ -0.17
CLDND2Q8NHS1 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC13.99□□□□□ -0.17
CLDND2Q8NHS1 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDND2Q8NHS1 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC13.99□□□□□ -0.17
CLDND2Q8NHS1 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDND2Q8NHS1 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CLDND2Q8NHS1 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.99□□□□□ -0.17
CLDND2Q8NHS1 RNU1-129P-201ENST00000384064 167 ntBASIC13.99□□□□□ -0.17
CLDND2Q8NHS1 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC13.99□□□□□ -0.17
CLDND2Q8NHS1 SPCS2P4-201ENST00000436160 681 ntBASIC13.99□□□□□ -0.17
CLDND2Q8NHS1 FAM86GP-201ENST00000448322 971 ntBASIC13.99□□□□□ -0.17
CLDND2Q8NHS1 IGHV3-62-201ENST00000520057 340 ntBASIC13.99□□□□□ -0.17
CLDND2Q8NHS1 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
CLDND2Q8NHS1 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.99□□□□□ -0.17
CLDND2Q8NHS1 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDND2Q8NHS1 U1.21-201ENST00000580816 167 ntBASIC13.99□□□□□ -0.17
CLDND2Q8NHS1 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDND2Q8NHS1 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.99□□□□□ -0.17
CLDND2Q8NHS1 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDND2Q8NHS1 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CLDND2Q8NHS1 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.99□□□□□ -0.17
CLDND2Q8NHS1 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDND2Q8NHS1 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CLDND2Q8NHS1 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDND2Q8NHS1 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CLDND2Q8NHS1 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CLDND2Q8NHS1 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDND2Q8NHS1 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CLDND2Q8NHS1 FRMD8P1-201ENST00000440433 1524 ntBASIC13.99□□□□□ -0.17
CLDND2Q8NHS1 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.99□□□□□ -0.17
CLDND2Q8NHS1 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLDND2Q8NHS1 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CLDND2Q8NHS1 HARS-204ENST00000438307 1789 ntTSL 2 BASIC13.99□□□□□ -0.17
CLDND2Q8NHS1 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CLDND2Q8NHS1 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms