Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 PSMD2-205ENST00000435761 2574 ntTSL 2 BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 AC120024.4-201ENST00000624285 2143 ntBASIC10.09□□□□□ -0.79
SVIPQ8NHG7 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 AC132938.6-201ENST00000623828 1655 ntBASIC10.09□□□□□ -0.79
SVIPQ8NHG7 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 AC005696.4-201ENST00000614400 3147 ntBASIC10.09□□□□□ -0.79
SVIPQ8NHG7 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 CYTH4-201ENST00000248901 3206 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 PRKCQ-203ENST00000539722 3224 ntTSL 2 BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 CELF4-218ENST00000591287 3757 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SVIPQ8NHG7 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
SVIPQ8NHG7 C14orf159-223ENST00000522322 2856 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
SVIPQ8NHG7 CAPRIN1-212ENST00000532820 3438 ntAPPRIS P4 TSL 1 (best) BASIC10.08□□□□□ -0.8
SVIPQ8NHG7 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SVIPQ8NHG7 YEATS2-AS1-201ENST00000425008 2442 ntTSL 4 BASIC10.08□□□□□ -0.8
SVIPQ8NHG7 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SVIPQ8NHG7 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SVIPQ8NHG7 CHMP2B-203ENST00000471660 2528 ntTSL 2 BASIC10.08□□□□□ -0.8
SVIPQ8NHG7 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC10.08□□□□□ -0.8
SVIPQ8NHG7 KRT8P45-201ENST00000414328 1447 ntBASIC10.08□□□□□ -0.8
SVIPQ8NHG7 AL365259.1-204ENST00000606001 2635 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SVIPQ8NHG7 AC008132.1-201ENST00000419447 2068 ntTSL 5 BASIC10.08□□□□□ -0.8
SVIPQ8NHG7 CDKN2B-201ENST00000276925 3911 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SVIPQ8NHG7 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
SVIPQ8NHG7 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
SVIPQ8NHG7 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC10.08□□□□□ -0.8
SVIPQ8NHG7 CHN2-211ENST00000424025 2279 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SVIPQ8NHG7 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SVIPQ8NHG7 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC10.08□□□□□ -0.8
SVIPQ8NHG7 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC10.08□□□□□ -0.8
SVIPQ8NHG7 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
SVIPQ8NHG7 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SVIPQ8NHG7 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SVIPQ8NHG7 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC10.08□□□□□ -0.8
SVIPQ8NHG7 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SVIPQ8NHG7 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC10.08□□□□□ -0.8
SVIPQ8NHG7 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC10.08□□□□□ -0.8
SVIPQ8NHG7 ALOX12P2-203ENST00000570921 1945 ntBASIC10.08□□□□□ -0.8
SVIPQ8NHG7 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC10.08□□□□□ -0.8
SVIPQ8NHG7 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC10.08□□□□□ -0.8
SVIPQ8NHG7 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SVIPQ8NHG7 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SVIPQ8NHG7 NCAM1-226ENST00000619839 2993 ntTSL 5 BASIC10.08□□□□□ -0.8
SVIPQ8NHG7 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SVIPQ8NHG7 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
SVIPQ8NHG7 CR769775.4-201ENST00000638516 4139 ntBASIC10.08□□□□□ -0.8
SVIPQ8NHG7 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SVIPQ8NHG7 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
SVIPQ8NHG7 PWP1-201ENST00000412830 2621 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SVIPQ8NHG7 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SVIPQ8NHG7 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SVIPQ8NHG7 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SVIPQ8NHG7 BTG1-201ENST00000256015 4680 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SVIPQ8NHG7 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SVIPQ8NHG7 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC10.08□□□□□ -0.8
SVIPQ8NHG7 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
SVIPQ8NHG7 HHLA1-202ENST00000434736 2369 ntAPPRIS P5 TSL 5 BASIC10.08□□□□□ -0.8
SVIPQ8NHG7 AC024614.4-201ENST00000637454 2396 ntTSL 5 BASIC10.08□□□□□ -0.8
SVIPQ8NHG7 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SVIPQ8NHG7 CHGB-201ENST00000378961 2550 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SVIPQ8NHG7 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SVIPQ8NHG7 ZNF300-202ENST00000394226 3256 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
SVIPQ8NHG7 AMPD2-201ENST00000256578 3899 ntAPPRIS P2 TSL 5 BASIC10.08□□□□□ -0.8
SVIPQ8NHG7 CDV3-209ENST00000515421 1305 ntTSL 3 BASIC10.07□□□□□ -0.8
SVIPQ8NHG7 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SVIPQ8NHG7 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
SVIPQ8NHG7 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC10.07□□□□□ -0.8
SVIPQ8NHG7 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SVIPQ8NHG7 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SVIPQ8NHG7 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC10.07□□□□□ -0.8
SVIPQ8NHG7 AC046185.3-201ENST00000623228 1824 ntBASIC10.07□□□□□ -0.8
SVIPQ8NHG7 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
SVIPQ8NHG7 FAM47B-201ENST00000329357 2120 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
SVIPQ8NHG7 CREM-204ENST00000345491 2220 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
SVIPQ8NHG7 NBPF19-202ENST00000426482 2344 ntTSL 5 BASIC10.07□□□□□ -0.8
SVIPQ8NHG7 AC004241.5-201ENST00000623870 2448 ntBASIC10.07□□□□□ -0.8
SVIPQ8NHG7 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC10.07□□□□□ -0.8
SVIPQ8NHG7 RAVER1-208ENST00000617231 3501 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
SVIPQ8NHG7 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
SVIPQ8NHG7 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SVIPQ8NHG7 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SVIPQ8NHG7 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SVIPQ8NHG7 MMAA-201ENST00000281317 7068 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
SVIPQ8NHG7 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
SVIPQ8NHG7 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
SVIPQ8NHG7 PLK4-203ENST00000507249 3195 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
SVIPQ8NHG7 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
SVIPQ8NHG7 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SVIPQ8NHG7 ITGB6-205ENST00000428609 2576 ntTSL 2 BASIC10.07□□□□□ -0.8
SVIPQ8NHG7 KCNS3-202ENST00000403915 2397 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SVIPQ8NHG7 ABLIM3-203ENST00000356541 2290 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SVIPQ8NHG7 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC10.07□□□□□ -0.8
SVIPQ8NHG7 AL132642.2-201ENST00000623423 1998 ntBASIC10.07□□□□□ -0.8
SVIPQ8NHG7 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
SVIPQ8NHG7 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SVIPQ8NHG7 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC10.07□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms