Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TTC9CQ8N5M4 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TTC9CQ8N5M4 AL009183.1-201ENST00000603760 355 ntBASIC13.02□□□□□ -0.33
TTC9CQ8N5M4 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.02□□□□□ -0.33
TTC9CQ8N5M4 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
TTC9CQ8N5M4 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
TTC9CQ8N5M4 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TTC9CQ8N5M4 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TTC9CQ8N5M4 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TTC9CQ8N5M4 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC13.02□□□□□ -0.33
TTC9CQ8N5M4 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
TTC9CQ8N5M4 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
TTC9CQ8N5M4 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC13.02□□□□□ -0.33
TTC9CQ8N5M4 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC13.02□□□□□ -0.33
TTC9CQ8N5M4 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TTC9CQ8N5M4 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TTC9CQ8N5M4 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.02□□□□□ -0.33
TTC9CQ8N5M4 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 AL662844.4-201ENST00000606367 2838 ntBASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 TEX30-205ENST00000376029 959 ntTSL 2 BASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 HNRNPA1P28-201ENST00000424481 961 ntBASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 AC007967.2-201ENST00000432613 625 ntBASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 KRT18P2-201ENST00000447938 1258 ntBASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 HS6ST1P1-201ENST00000481504 1234 ntBASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 RNA5SP416-201ENST00000516838 111 ntBASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 KRT19P2-202ENST00000557173 1012 ntBASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 AC027601.4-201ENST00000611259 610 ntBASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 AC120114.3-201ENST00000611923 658 ntBASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 DOC2GP-204ENST00000639052 2548 ntBASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TTC9CQ8N5M4 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13□□□□□ -0.33
TTC9CQ8N5M4 AC092364.2-201ENST00000596710 2692 ntBASIC13□□□□□ -0.33
TTC9CQ8N5M4 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TTC9CQ8N5M4 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TTC9CQ8N5M4 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
TTC9CQ8N5M4 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
TTC9CQ8N5M4 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
TTC9CQ8N5M4 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC13□□□□□ -0.33
TTC9CQ8N5M4 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
TTC9CQ8N5M4 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC13□□□□□ -0.33
TTC9CQ8N5M4 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC13□□□□□ -0.33
TTC9CQ8N5M4 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
TTC9CQ8N5M4 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
TTC9CQ8N5M4 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TTC9CQ8N5M4 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13□□□□□ -0.33
TTC9CQ8N5M4 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC13□□□□□ -0.33
TTC9CQ8N5M4 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13□□□□□ -0.33
TTC9CQ8N5M4 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
TTC9CQ8N5M4 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms