Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL23A1Q86Y22 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL23A1Q86Y22 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COL23A1Q86Y22 U82695.1-201ENST00000635752 1889 ntBASIC20.28■□□□□ 0.84
COL23A1Q86Y22 NEFHP1-201ENST00000412845 2629 ntBASIC20.28■□□□□ 0.84
COL23A1Q86Y22 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
COL23A1Q86Y22 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL23A1Q86Y22 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.28■□□□□ 0.84
COL23A1Q86Y22 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL23A1Q86Y22 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
COL23A1Q86Y22 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COL23A1Q86Y22 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC20.28■□□□□ 0.84
COL23A1Q86Y22 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
COL23A1Q86Y22 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC20.28■□□□□ 0.84
COL23A1Q86Y22 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC20.28■□□□□ 0.84
COL23A1Q86Y22 OARD1-212ENST00000482515 832 ntTSL 2 BASIC20.28■□□□□ 0.84
COL23A1Q86Y22 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL23A1Q86Y22 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
COL23A1Q86Y22 AC120045.2-201ENST00000567334 178 ntBASIC20.28■□□□□ 0.84
COL23A1Q86Y22 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC20.28■□□□□ 0.84
COL23A1Q86Y22 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COL23A1Q86Y22 PRKN-211ENST00000615065 261 ntTSL 5 BASIC20.28■□□□□ 0.84
COL23A1Q86Y22 AC005252.2-201ENST00000624630 1141 ntBASIC20.28■□□□□ 0.84
COL23A1Q86Y22 SNX1-214ENST00000625244 324 ntTSL 5 BASIC20.28■□□□□ 0.84
COL23A1Q86Y22 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL23A1Q86Y22 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
COL23A1Q86Y22 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL23A1Q86Y22 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL23A1Q86Y22 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COL23A1Q86Y22 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC20.28■□□□□ 0.84
COL23A1Q86Y22 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COL23A1Q86Y22 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COL23A1Q86Y22 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.28■□□□□ 0.84
COL23A1Q86Y22 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL23A1Q86Y22 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC20.28■□□□□ 0.84
COL23A1Q86Y22 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COL23A1Q86Y22 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL23A1Q86Y22 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL23A1Q86Y22 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
COL23A1Q86Y22 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
COL23A1Q86Y22 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.27■□□□□ 0.84
COL23A1Q86Y22 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL23A1Q86Y22 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
COL23A1Q86Y22 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL23A1Q86Y22 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL23A1Q86Y22 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL23A1Q86Y22 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC20.27■□□□□ 0.84
COL23A1Q86Y22 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL23A1Q86Y22 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL23A1Q86Y22 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
COL23A1Q86Y22 C1QBPP1-201ENST00000400117 770 ntBASIC20.27■□□□□ 0.84
COL23A1Q86Y22 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
COL23A1Q86Y22 ARTN-209ENST00000479128 471 ntTSL 3 BASIC20.27■□□□□ 0.84
COL23A1Q86Y22 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
COL23A1Q86Y22 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
COL23A1Q86Y22 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC20.27■□□□□ 0.84
COL23A1Q86Y22 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
COL23A1Q86Y22 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC20.27■□□□□ 0.84
COL23A1Q86Y22 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL23A1Q86Y22 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
COL23A1Q86Y22 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
COL23A1Q86Y22 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL23A1Q86Y22 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL23A1Q86Y22 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
COL23A1Q86Y22 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
COL23A1Q86Y22 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
COL23A1Q86Y22 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
COL23A1Q86Y22 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
COL23A1Q86Y22 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COL23A1Q86Y22 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.26■□□□□ 0.83
COL23A1Q86Y22 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
COL23A1Q86Y22 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.26■□□□□ 0.83
COL23A1Q86Y22 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL23A1Q86Y22 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL23A1Q86Y22 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
COL23A1Q86Y22 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL23A1Q86Y22 AL645728.1-201ENST00000366221 2101 ntBASIC20.26■□□□□ 0.83
COL23A1Q86Y22 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
COL23A1Q86Y22 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL23A1Q86Y22 RERG-209ENST00000546331 1383 ntTSL 2 BASIC20.26■□□□□ 0.83
COL23A1Q86Y22 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COL23A1Q86Y22 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL23A1Q86Y22 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL23A1Q86Y22 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COL23A1Q86Y22 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC20.26■□□□□ 0.83
COL23A1Q86Y22 AKR7A2P1-201ENST00000460134 915 ntBASIC20.26■□□□□ 0.83
COL23A1Q86Y22 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL23A1Q86Y22 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC20.26■□□□□ 0.83
COL23A1Q86Y22 AC105129.2-201ENST00000559536 390 ntBASIC20.26■□□□□ 0.83
COL23A1Q86Y22 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC20.26■□□□□ 0.83
COL23A1Q86Y22 NAT9-224ENST00000583757 583 ntTSL 3 BASIC20.26■□□□□ 0.83
COL23A1Q86Y22 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL23A1Q86Y22 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC20.26■□□□□ 0.83
COL23A1Q86Y22 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL23A1Q86Y22 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC20.26■□□□□ 0.83
COL23A1Q86Y22 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL23A1Q86Y22 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COL23A1Q86Y22 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COL23A1Q86Y22 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL23A1Q86Y22 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms