Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC20.36■□□□□ 0.85
UBE3BQ7Z3V4 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
UBE3BQ7Z3V4 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBE3BQ7Z3V4 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBE3BQ7Z3V4 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBE3BQ7Z3V4 PCDHA12-202ENST00000613593 2588 ntBASIC20.36■□□□□ 0.85
UBE3BQ7Z3V4 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBE3BQ7Z3V4 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBE3BQ7Z3V4 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC20.36■□□□□ 0.85
UBE3BQ7Z3V4 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC20.35■□□□□ 0.85
UBE3BQ7Z3V4 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
UBE3BQ7Z3V4 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC20.35■□□□□ 0.85
UBE3BQ7Z3V4 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC20.35■□□□□ 0.85
UBE3BQ7Z3V4 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
UBE3BQ7Z3V4 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBE3BQ7Z3V4 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBE3BQ7Z3V4 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
UBE3BQ7Z3V4 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC20.35■□□□□ 0.85
UBE3BQ7Z3V4 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UBE3BQ7Z3V4 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBE3BQ7Z3V4 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UBE3BQ7Z3V4 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UBE3BQ7Z3V4 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBE3BQ7Z3V4 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UBE3BQ7Z3V4 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC20.35■□□□□ 0.85
UBE3BQ7Z3V4 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC20.35■□□□□ 0.85
UBE3BQ7Z3V4 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UBE3BQ7Z3V4 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC20.35■□□□□ 0.85
UBE3BQ7Z3V4 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UBE3BQ7Z3V4 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC20.35■□□□□ 0.85
UBE3BQ7Z3V4 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBE3BQ7Z3V4 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBE3BQ7Z3V4 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC20.35■□□□□ 0.85
UBE3BQ7Z3V4 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UBE3BQ7Z3V4 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC20.35■□□□□ 0.85
UBE3BQ7Z3V4 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC20.35■□□□□ 0.85
UBE3BQ7Z3V4 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UBE3BQ7Z3V4 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBE3BQ7Z3V4 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBE3BQ7Z3V4 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBE3BQ7Z3V4 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBE3BQ7Z3V4 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.35■□□□□ 0.85
UBE3BQ7Z3V4 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC20.35■□□□□ 0.85
UBE3BQ7Z3V4 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC20.35■□□□□ 0.85
UBE3BQ7Z3V4 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UBE3BQ7Z3V4 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC20.35■□□□□ 0.85
UBE3BQ7Z3V4 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UBE3BQ7Z3V4 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UBE3BQ7Z3V4 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBE3BQ7Z3V4 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBE3BQ7Z3V4 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBE3BQ7Z3V4 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC20.34■□□□□ 0.85
UBE3BQ7Z3V4 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBE3BQ7Z3V4 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC20.34■□□□□ 0.85
UBE3BQ7Z3V4 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBE3BQ7Z3V4 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC20.34■□□□□ 0.85
UBE3BQ7Z3V4 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBE3BQ7Z3V4 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
UBE3BQ7Z3V4 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
UBE3BQ7Z3V4 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
UBE3BQ7Z3V4 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBE3BQ7Z3V4 POU5F1P6-201ENST00000466990 990 ntBASIC20.34■□□□□ 0.85
UBE3BQ7Z3V4 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC20.34■□□□□ 0.85
UBE3BQ7Z3V4 AL512361.1-201ENST00000554200 418 ntBASIC20.34■□□□□ 0.85
UBE3BQ7Z3V4 MIR4321-201ENST00000592276 80 ntBASIC20.34■□□□□ 0.85
UBE3BQ7Z3V4 AC079328.2-201ENST00000561241 3354 ntBASIC20.34■□□□□ 0.85
UBE3BQ7Z3V4 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
UBE3BQ7Z3V4 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
UBE3BQ7Z3V4 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBE3BQ7Z3V4 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
UBE3BQ7Z3V4 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBE3BQ7Z3V4 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBE3BQ7Z3V4 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC20.34■□□□□ 0.85
UBE3BQ7Z3V4 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
UBE3BQ7Z3V4 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
UBE3BQ7Z3V4 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
UBE3BQ7Z3V4 IMPDH1P4-201ENST00000445028 1534 ntBASIC20.33■□□□□ 0.85
UBE3BQ7Z3V4 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC20.33■□□□□ 0.85
UBE3BQ7Z3V4 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
UBE3BQ7Z3V4 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
UBE3BQ7Z3V4 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
UBE3BQ7Z3V4 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
UBE3BQ7Z3V4 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
UBE3BQ7Z3V4 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
UBE3BQ7Z3V4 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
UBE3BQ7Z3V4 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
UBE3BQ7Z3V4 GOLGA6L11P-201ENST00000417252 1298 ntBASIC20.33■□□□□ 0.85
UBE3BQ7Z3V4 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC20.33■□□□□ 0.85
UBE3BQ7Z3V4 STOM-203ENST00000538954 1257 ntTSL 5 BASIC20.33■□□□□ 0.85
UBE3BQ7Z3V4 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC20.33■□□□□ 0.85
UBE3BQ7Z3V4 PRR29-209ENST00000582540 967 ntTSL 2 BASIC20.33■□□□□ 0.85
UBE3BQ7Z3V4 AC026979.3-201ENST00000607315 403 ntBASIC20.33■□□□□ 0.85
UBE3BQ7Z3V4 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
UBE3BQ7Z3V4 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
UBE3BQ7Z3V4 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
UBE3BQ7Z3V4 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
UBE3BQ7Z3V4 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
UBE3BQ7Z3V4 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
UBE3BQ7Z3V4 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
UBE3BQ7Z3V4 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms