Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.51■□□□□ 0.23
LYSMD3Q7Z3D4 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LYSMD3Q7Z3D4 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
LYSMD3Q7Z3D4 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LYSMD3Q7Z3D4 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LYSMD3Q7Z3D4 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
LYSMD3Q7Z3D4 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.51■□□□□ 0.23
LYSMD3Q7Z3D4 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LYSMD3Q7Z3D4 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LYSMD3Q7Z3D4 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.51■□□□□ 0.23
LYSMD3Q7Z3D4 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LYSMD3Q7Z3D4 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LYSMD3Q7Z3D4 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LYSMD3Q7Z3D4 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.51■□□□□ 0.23
LYSMD3Q7Z3D4 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.51■□□□□ 0.23
LYSMD3Q7Z3D4 AC079140.1-201ENST00000508039 487 ntBASIC16.51■□□□□ 0.23
LYSMD3Q7Z3D4 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.51■□□□□ 0.23
LYSMD3Q7Z3D4 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.51■□□□□ 0.23
LYSMD3Q7Z3D4 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.51■□□□□ 0.23
LYSMD3Q7Z3D4 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.51■□□□□ 0.23
LYSMD3Q7Z3D4 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.51■□□□□ 0.23
LYSMD3Q7Z3D4 AP001160.2-201ENST00000596071 487 ntBASIC16.51■□□□□ 0.23
LYSMD3Q7Z3D4 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.51■□□□□ 0.23
LYSMD3Q7Z3D4 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.51■□□□□ 0.23
LYSMD3Q7Z3D4 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.51■□□□□ 0.23
LYSMD3Q7Z3D4 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LYSMD3Q7Z3D4 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LYSMD3Q7Z3D4 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.51■□□□□ 0.23
LYSMD3Q7Z3D4 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LYSMD3Q7Z3D4 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LYSMD3Q7Z3D4 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
LYSMD3Q7Z3D4 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
LYSMD3Q7Z3D4 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
LYSMD3Q7Z3D4 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
LYSMD3Q7Z3D4 AC073439.1-201ENST00000624121 1774 ntBASIC16.51■□□□□ 0.23
LYSMD3Q7Z3D4 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.51■□□□□ 0.23
LYSMD3Q7Z3D4 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LYSMD3Q7Z3D4 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LYSMD3Q7Z3D4 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
LYSMD3Q7Z3D4 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LYSMD3Q7Z3D4 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.5■□□□□ 0.23
LYSMD3Q7Z3D4 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LYSMD3Q7Z3D4 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
LYSMD3Q7Z3D4 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LYSMD3Q7Z3D4 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.5■□□□□ 0.23
LYSMD3Q7Z3D4 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.5■□□□□ 0.23
LYSMD3Q7Z3D4 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
LYSMD3Q7Z3D4 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LYSMD3Q7Z3D4 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LYSMD3Q7Z3D4 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LYSMD3Q7Z3D4 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LYSMD3Q7Z3D4 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LYSMD3Q7Z3D4 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LYSMD3Q7Z3D4 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
LYSMD3Q7Z3D4 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.5■□□□□ 0.23
LYSMD3Q7Z3D4 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.5■□□□□ 0.23
LYSMD3Q7Z3D4 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.5■□□□□ 0.23
LYSMD3Q7Z3D4 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.5■□□□□ 0.23
LYSMD3Q7Z3D4 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.5■□□□□ 0.23
LYSMD3Q7Z3D4 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.5■□□□□ 0.23
LYSMD3Q7Z3D4 AC022145.2-201ENST00000598203 171 ntBASIC16.5■□□□□ 0.23
LYSMD3Q7Z3D4 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.5■□□□□ 0.23
LYSMD3Q7Z3D4 AC105339.1-204ENST00000636249 355 ntBASIC16.5■□□□□ 0.23
LYSMD3Q7Z3D4 CROCCP1-201ENST00000426910 5675 ntBASIC16.5■□□□□ 0.23
LYSMD3Q7Z3D4 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.5■□□□□ 0.23
LYSMD3Q7Z3D4 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LYSMD3Q7Z3D4 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LYSMD3Q7Z3D4 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LYSMD3Q7Z3D4 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.5■□□□□ 0.23
LYSMD3Q7Z3D4 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LYSMD3Q7Z3D4 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LYSMD3Q7Z3D4 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
LYSMD3Q7Z3D4 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LYSMD3Q7Z3D4 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LYSMD3Q7Z3D4 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LYSMD3Q7Z3D4 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
LYSMD3Q7Z3D4 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LYSMD3Q7Z3D4 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
LYSMD3Q7Z3D4 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LYSMD3Q7Z3D4 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
LYSMD3Q7Z3D4 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.49■□□□□ 0.23
LYSMD3Q7Z3D4 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LYSMD3Q7Z3D4 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LYSMD3Q7Z3D4 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
LYSMD3Q7Z3D4 AC092850.2-201ENST00000623821 2697 ntBASIC16.49■□□□□ 0.23
LYSMD3Q7Z3D4 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LYSMD3Q7Z3D4 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
LYSMD3Q7Z3D4 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.49■□□□□ 0.23
LYSMD3Q7Z3D4 SPCS2P4-201ENST00000436160 681 ntBASIC16.49■□□□□ 0.23
LYSMD3Q7Z3D4 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.49■□□□□ 0.23
LYSMD3Q7Z3D4 DNAJB3-202ENST00000449667 1266 ntBASIC16.49■□□□□ 0.23
LYSMD3Q7Z3D4 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.49■□□□□ 0.23
LYSMD3Q7Z3D4 PRYP6-201ENST00000514804 343 ntBASIC16.49■□□□□ 0.23
LYSMD3Q7Z3D4 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.49■□□□□ 0.23
LYSMD3Q7Z3D4 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
LYSMD3Q7Z3D4 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.49■□□□□ 0.23
LYSMD3Q7Z3D4 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.49■□□□□ 0.23
LYSMD3Q7Z3D4 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.49■□□□□ 0.23
LYSMD3Q7Z3D4 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.49■□□□□ 0.23
LYSMD3Q7Z3D4 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms