Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
SCXQ7RTU7 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC10.97□□□□□ -0.65
SCXQ7RTU7 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SCXQ7RTU7 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC10.97□□□□□ -0.65
SCXQ7RTU7 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC10.97□□□□□ -0.65
SCXQ7RTU7 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SCXQ7RTU7 WT1-209ENST00000530998 2421 ntTSL 2 BASIC10.97□□□□□ -0.65
SCXQ7RTU7 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
SCXQ7RTU7 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC10.97□□□□□ -0.65
SCXQ7RTU7 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SCXQ7RTU7 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC10.97□□□□□ -0.65
SCXQ7RTU7 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SCXQ7RTU7 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC10.97□□□□□ -0.65
SCXQ7RTU7 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SCXQ7RTU7 DBET-201ENST00000630918 3363 ntBASIC10.97□□□□□ -0.65
SCXQ7RTU7 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SCXQ7RTU7 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SCXQ7RTU7 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SCXQ7RTU7 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC10.97□□□□□ -0.65
SCXQ7RTU7 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC10.96□□□□□ -0.65
SCXQ7RTU7 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
SCXQ7RTU7 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC10.96□□□□□ -0.65
SCXQ7RTU7 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC10.96□□□□□ -0.65
SCXQ7RTU7 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SCXQ7RTU7 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SCXQ7RTU7 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SCXQ7RTU7 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC10.96□□□□□ -0.65
SCXQ7RTU7 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC10.96□□□□□ -0.65
SCXQ7RTU7 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
SCXQ7RTU7 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SCXQ7RTU7 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
SCXQ7RTU7 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC10.96□□□□□ -0.65
SCXQ7RTU7 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
SCXQ7RTU7 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SCXQ7RTU7 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
SCXQ7RTU7 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.65
SCXQ7RTU7 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC10.96□□□□□ -0.65
SCXQ7RTU7 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC10.96□□□□□ -0.65
SCXQ7RTU7 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC10.96□□□□□ -0.65
SCXQ7RTU7 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
SCXQ7RTU7 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SCXQ7RTU7 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
SCXQ7RTU7 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
SCXQ7RTU7 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SCXQ7RTU7 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC10.96□□□□□ -0.65
SCXQ7RTU7 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC10.96□□□□□ -0.65
SCXQ7RTU7 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SCXQ7RTU7 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SCXQ7RTU7 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC10.96□□□□□ -0.65
SCXQ7RTU7 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
SCXQ7RTU7 IGLL3P-201ENST00000412472 434 ntBASIC10.96□□□□□ -0.65
SCXQ7RTU7 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC10.96□□□□□ -0.65
SCXQ7RTU7 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC10.96□□□□□ -0.65
SCXQ7RTU7 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC10.96□□□□□ -0.65
SCXQ7RTU7 AP006288.1-201ENST00000446065 395 ntBASIC10.96□□□□□ -0.65
SCXQ7RTU7 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC10.96□□□□□ -0.65
SCXQ7RTU7 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC10.96□□□□□ -0.65
SCXQ7RTU7 RIN3-211ENST00000557762 517 ntTSL 3 BASIC10.96□□□□□ -0.65
SCXQ7RTU7 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
SCXQ7RTU7 MNT-208ENST00000575394 606 ntTSL 4 BASIC10.96□□□□□ -0.65
SCXQ7RTU7 MIR4469-201ENST00000583919 79 ntBASIC10.96□□□□□ -0.65
SCXQ7RTU7 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SCXQ7RTU7 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC10.96□□□□□ -0.65
SCXQ7RTU7 AL078644.1-201ENST00000609881 752 ntBASIC10.96□□□□□ -0.65
SCXQ7RTU7 AL596442.2-201ENST00000610240 980 ntBASIC10.96□□□□□ -0.65
SCXQ7RTU7 GGTLC5P-201ENST00000617623 998 ntBASIC10.96□□□□□ -0.65
SCXQ7RTU7 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SCXQ7RTU7 AC010507.1-201ENST00000633895 436 ntBASIC10.96□□□□□ -0.65
SCXQ7RTU7 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SCXQ7RTU7 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SCXQ7RTU7 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
SCXQ7RTU7 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
SCXQ7RTU7 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC10.96□□□□□ -0.66
SCXQ7RTU7 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC10.96□□□□□ -0.66
SCXQ7RTU7 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
SCXQ7RTU7 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
SCXQ7RTU7 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC10.96□□□□□ -0.66
SCXQ7RTU7 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SCXQ7RTU7 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
SCXQ7RTU7 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SCXQ7RTU7 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
SCXQ7RTU7 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SCXQ7RTU7 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SCXQ7RTU7 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
SCXQ7RTU7 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SCXQ7RTU7 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
SCXQ7RTU7 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
SCXQ7RTU7 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
SCXQ7RTU7 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
SCXQ7RTU7 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SCXQ7RTU7 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC10.96□□□□□ -0.66
SCXQ7RTU7 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.66
SCXQ7RTU7 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
SCXQ7RTU7 PAUPAR-201ENST00000630360 2965 ntBASIC10.95□□□□□ -0.66
SCXQ7RTU7 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC10.95□□□□□ -0.66
SCXQ7RTU7 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SCXQ7RTU7 PI4KAP1-204ENST00000612579 1703 ntBASIC10.95□□□□□ -0.66
SCXQ7RTU7 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC10.95□□□□□ -0.66
SCXQ7RTU7 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SCXQ7RTU7 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms