Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SHFQ7M4L6 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
SHFQ7M4L6 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
SHFQ7M4L6 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SHFQ7M4L6 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SHFQ7M4L6 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SHFQ7M4L6 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
SHFQ7M4L6 AC002310.6-201ENST00000624451 1377 ntBASIC14.9□□□□□ -0.02
SHFQ7M4L6 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.9□□□□□ -0.02
SHFQ7M4L6 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SHFQ7M4L6 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
SHFQ7M4L6 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SHFQ7M4L6 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.9□□□□□ -0.02
SHFQ7M4L6 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SHFQ7M4L6 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.9□□□□□ -0.02
SHFQ7M4L6 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC14.9□□□□□ -0.02
SHFQ7M4L6 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.9□□□□□ -0.02
SHFQ7M4L6 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.9□□□□□ -0.02
SHFQ7M4L6 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SHFQ7M4L6 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.9□□□□□ -0.02
SHFQ7M4L6 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.9□□□□□ -0.02
SHFQ7M4L6 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14.9□□□□□ -0.02
SHFQ7M4L6 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.9□□□□□ -0.02
SHFQ7M4L6 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SHFQ7M4L6 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SHFQ7M4L6 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SHFQ7M4L6 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.9□□□□□ -0.02
SHFQ7M4L6 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SHFQ7M4L6 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SHFQ7M4L6 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SHFQ7M4L6 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SHFQ7M4L6 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SHFQ7M4L6 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
SHFQ7M4L6 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SHFQ7M4L6 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SHFQ7M4L6 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SHFQ7M4L6 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.89□□□□□ -0.03
SHFQ7M4L6 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SHFQ7M4L6 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SHFQ7M4L6 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SHFQ7M4L6 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SHFQ7M4L6 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SHFQ7M4L6 LINC02447-202ENST00000501888 2146 ntBASIC14.89□□□□□ -0.03
SHFQ7M4L6 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
SHFQ7M4L6 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SHFQ7M4L6 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SHFQ7M4L6 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SHFQ7M4L6 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SHFQ7M4L6 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SHFQ7M4L6 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.89□□□□□ -0.03
SHFQ7M4L6 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SHFQ7M4L6 ARMC10P1-201ENST00000313754 855 ntBASIC14.89□□□□□ -0.03
SHFQ7M4L6 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SHFQ7M4L6 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SHFQ7M4L6 KRT18P35-201ENST00000510488 1269 ntBASIC14.89□□□□□ -0.03
SHFQ7M4L6 FOSL1P1-201ENST00000511041 816 ntBASIC14.89□□□□□ -0.03
SHFQ7M4L6 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.89□□□□□ -0.03
SHFQ7M4L6 TPM1-226ENST00000560959 925 ntTSL 2 BASIC14.89□□□□□ -0.03
SHFQ7M4L6 AC139887.3-201ENST00000568585 713 ntBASIC14.89□□□□□ -0.03
SHFQ7M4L6 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.89□□□□□ -0.03
SHFQ7M4L6 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.89□□□□□ -0.03
SHFQ7M4L6 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.89□□□□□ -0.03
SHFQ7M4L6 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.89□□□□□ -0.03
SHFQ7M4L6 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
SHFQ7M4L6 AC093458.2-201ENST00000623150 629 ntBASIC14.89□□□□□ -0.03
SHFQ7M4L6 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC14.89□□□□□ -0.03
SHFQ7M4L6 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SHFQ7M4L6 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SHFQ7M4L6 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.89□□□□□ -0.03
SHFQ7M4L6 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SHFQ7M4L6 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SHFQ7M4L6 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SHFQ7M4L6 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SHFQ7M4L6 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SHFQ7M4L6 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SHFQ7M4L6 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SHFQ7M4L6 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.89□□□□□ -0.03
SHFQ7M4L6 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SHFQ7M4L6 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.89□□□□□ -0.03
SHFQ7M4L6 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SHFQ7M4L6 CDC14C-201ENST00000428251 1719 ntBASIC14.89□□□□□ -0.03
SHFQ7M4L6 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SHFQ7M4L6 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
SHFQ7M4L6 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SHFQ7M4L6 PCGF3-213ENST00000620529 1899 ntBASIC14.89□□□□□ -0.03
SHFQ7M4L6 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SHFQ7M4L6 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SHFQ7M4L6 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHFQ7M4L6 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.88□□□□□ -0.03
SHFQ7M4L6 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SHFQ7M4L6 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.88□□□□□ -0.03
SHFQ7M4L6 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.88□□□□□ -0.03
SHFQ7M4L6 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHFQ7M4L6 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.88□□□□□ -0.03
SHFQ7M4L6 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
SHFQ7M4L6 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SHFQ7M4L6 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHFQ7M4L6 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.88□□□□□ -0.03
SHFQ7M4L6 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.88□□□□□ -0.03
SHFQ7M4L6 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms